RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 CRPP02741 224 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 POLR2KP53803 58 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 HCP5Q6MZN7 132 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 DEFB123Q8N688 67 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 WFDC9Q8NEX5 89 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 PRR15LQ9BU68 103 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 LENEPQ9Y5L5 61 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 S4R3C0 116 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 WDFY3Q8IZQ1 3526 aa3.26□□□□□ -1.89
ECHDC1-221ENST00000531582 COL27A1Q8IZC6 1860 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 IGHV1OR15-1A0A075B7D0 117 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 IGKV3D-20A0A0C4DH25 116 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 H3BPC8 53 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 H3BRN7 92 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 CLPSP04118 112 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 IGHV3-43DP0DP04 118 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 DEFB103AP81534 67 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 KRTAP1-1Q07627 177 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 Q6ZQT0 140 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 LINC01558Q9Y6Z2 57 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 FRYLO94915 3013 aa3.25□□□□□ -1.89
ECHDC1-221ENST00000531582 ZFHX3Q15911 3703 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 IGHV7-4-1A0A0J9YVY3 117 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 TRBV10-1A0A0K0K1A3 114 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 PINLYPA6NC86 204 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 NCR3O14931 201 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 HAMPP81172 84 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 B9D2Q9BPU9 175 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 KRTAP1-5Q9BYS1 174 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 KLK9Q9UKQ9 250 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 ASPMQ8IZT6 3477 aa3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 PRRC2BQ5JSZ5 2229 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-221ENST00000531582 ZNF407Q9C0G0 2248 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 ZFHX4Q86UP3 3567 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 IGHV3-35A0A0C4DH35 117 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 A8MU10 97 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 LY6G6DO95868 133 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 CR1P17927 2039 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 CNBPP62633 177 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 TMEM167AQ8TBQ9 72 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 LINC00208Q96KT6 92 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 HIGD2AQ9BW72 106 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 PLAC8Q9NZF1 115 aa3.23□□□□□ -1.89
ECHDC1-221ENST00000531582 RP1P56715 2156 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 IGHV3-73A0A0B4J1V6 119 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 IGKV2-29A2NJV5 120 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 H0YGG7 62 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 LECT2O14960 151 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 RTL8CO15255 209 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 IGKV3-11P04433 115 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 C9orf129Q5T035 196 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 FAM104AQ969W3 186 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 MUC6Q6W4X9 2439 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 DMXL1Q9Y485 3027 aa3.22□□□□□ -1.89
ECHDC1-221ENST00000531582 IGLV4-3A0A075B6K6 122 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 A0A087WYN8 130 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-49A0A0A0MS15 119 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 KRTAP29-1A8MX34 341 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 ATP6V0E1O15342 81 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 STATHP02808 62 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 ROMO1P60602 79 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 NDPQ00604 133 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 NNATQ16517 81 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 C20orf203Q8NBC4 194 aa3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 FGF23Q9GZV9 251 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-221ENST00000531582 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 KRTAP16-1A8MUX0 517 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-48P01763 117 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 MSMBP08118 114 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 CCL3P10147 92 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 ZFAND2AQ8N6M9 145 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 FLVCR1-AS1Q8TAF5 88 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 SMIM11BQ8TCY0 68 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 COX7B2Q8TF08 81 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 CADP27708 2225 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 LAMA5O15230 3695 aa3.2□□□□□ -1.9
ECHDC1-221ENST00000531582 PIEZO1Q92508 2521 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 ETDCA0A1B0GVM5 59 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 LYZP61626 148 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 C1orf134Q5TEV5 83 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 NTM-AS1Q6ZSK4 140 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 CNEP1R1Q8N9A8 125 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 RPL39LQ96EH5 51 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 CFAP47Q6ZTR5 3102 aa3.19□□□□□ -1.9
ECHDC1-221ENST00000531582 SPEGQ15772 3267 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 IGKV3D-15A0A087WSY6 115 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 B4DSR2 109 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 PRB4P10163 310 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV1-2P23083 117 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 MT3P25713 68 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 RPL39P62891 51 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 WT1-ASQ06250 92 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 KPRPQ5T749 579 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 FDCSPQ8NFU4 85 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 MUC7Q8TAX7 377 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms