RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 A0A1B0GUT8 65 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 A0A1W2PNM2 257 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 CISD3P0C7P0 127 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 CAV3P56539 151 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 LINC00483Q53H64 154 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 C1orf137Q5JT78 98 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 Q8TAT8 98 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 C4orf3Q8WVX3 66 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 PRR15LQ9BU68 103 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 LRP6O75581 1613 aa1.9□□□□□ -2.11
PTPRK-220ENST00000531466 DDX60LQ5H9U9 1706 aaKnown RBP1.89□□□□□ -2.11
PTPRK-220ENST00000531466 A0A1B0GU33 70 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 SMIM27A0A1W2PRY6 76 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 SPAG11BQ08648 103 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 NUMA1Q14980 2115 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 DEFB113Q30KQ7 82 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 SPAG11AQ6PDA7 123 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 Q8NAQ8 132 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 RNF5Q99942 180 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 TRPM6Q9BX84 2022 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 E9PCH4 1651 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 SCN7AQ01118 1682 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 ANKRD12Q6UB98 2062 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 DUOX1Q9NRD9 1551 aa1.89□□□□□ -2.11
PTPRK-220ENST00000531466 LY75O60449 1722 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 RICTORQ6R327 1708 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 NUPR2A6NF83 97 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 TFF1P04155 84 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 S100A3P33764 101 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 LYPD6Q86Y78 171 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 WFDC6Q9BQY6 131 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 UBL5Q9BZL1 73 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 R4GMQ9 66 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 V9GYV3 84 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 TANC2Q9HCD6 1990 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 DEPDC5O75140 1603 aa1.88□□□□□ -2.11
PTPRK-220ENST00000531466 DOCK11Q5JSL3 2073 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 BRWD3Q6RI45 1802 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 KIAA1549LQ6ZVL6 1849 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 A0A087WVE0 104 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 A0A0J9YX75 114 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 NREPQ16612 68 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 GDF5OSQ5U4N7 250 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 KRTAP26-1Q6PEX3 210 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 MRPL36Q9P0J6 103 aaKnown RBP1.87□□□□□ -2.11
PTPRK-220ENST00000531466 LHFPL6Q9Y693 200 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 MINOS1-NBL1R4GNA1 71 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 MUC22E2RYF6 1773 aaPredicted RBP1.87□□□□□ -2.11
PTPRK-220ENST00000531466 PCNX2A6NKB5 2137 aa1.87□□□□□ -2.11
PTPRK-220ENST00000531466 FBN3Q75N90 2809 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 COL27A1Q8IZC6 1860 aaPredicted RBP1.86□□□□□ -2.11
PTPRK-220ENST00000531466 PARP4Q9UKK3 1724 aaKnown RBP1.86□□□□□ -2.11
PTPRK-220ENST00000531466 PAPPA2Q9BXP8 1791 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 F8VRH5 84 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 KIAA2026Q5HYC2 2103 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 CSAG1Q6PB30 78 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 LAMA4Q16363 1823 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 TUBGCP6Q96RT7 1819 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 MUC4Q99102 2169 aa1.86□□□□□ -2.11
PTPRK-220ENST00000531466 ZNF236Q9UL36 1845 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 CLPSL1A2RUU4 121 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 UQCR11O14957 56 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 MGPP08493 103 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 PDE6HQ13956 83 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 C10orf113Q5VZT2 155 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 COX7B2Q8TF08 81 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 TMEM263Q8WUH6 116 aaKnown RBP1.85□□□□□ -2.11
PTPRK-220ENST00000531466 LINC00846Q9NV44 126 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 LINC01558Q9Y6Z2 57 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 PLXNA2O75051 1894 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 GREB1Q4ZG55 1949 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 TIAM2Q8IVF5 1701 aa1.85□□□□□ -2.11
PTPRK-220ENST00000531466 GBF1Q92538 1859 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 DLG5Q8TDM6 1919 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 JMJD7-PLA2G4BH0Y9G9 81 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 H0Y9P7 68 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 P0C880 135 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 CCL3L1P16619 93 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 CCL18P55774 89 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 FXYD6P3P58550 94 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 CNBPP62633 177 aaKnown RBP1.84□□□□□ -2.11
PTPRK-220ENST00000531466 KRTAP25-1Q3LHN0 102 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 LINC00208Q96KT6 92 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 OBSCN-AS1Q96MR7 158 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 SVILO95425 2214 aa1.84□□□□□ -2.11
PTPRK-220ENST00000531466 SCN3AQ9NY46 2000 aa1.84□□□□□ -2.12
PTPRK-220ENST00000531466 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
PTPRK-220ENST00000531466 PLXNB1O43157 2135 aa1.84□□□□□ -2.12
PTPRK-220ENST00000531466 LCTP09848 1927 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 NINQ8N4C6 2090 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 COL11A1P12107 1806 aaPredicted RBP1.83□□□□□ -2.12
PTPRK-220ENST00000531466 LCE6AA0A183 80 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 LINC01546A6NGU7 62 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 C10orf142B7Z368 130 aa1.83□□□□□ -2.12
PTPRK-220ENST00000531466 COX17Q14061 63 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms