RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 F8WDY8 70 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 ZNF861PO60384 105 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 PPP1R17O96001 155 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 TLX1NBP0CAT3 122 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 TAGLN2P37802 199 aaKnown RBP5.47□□□□□ -1.53
NEDD8-206ENST00000531430 RPL39P62891 51 aaKnown RBP5.47□□□□□ -1.53
NEDD8-206ENST00000531430 RIGQ13278 110 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 C2orf82Q6UX34 121 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 KRTAP7-1Q8IUC3 87 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
NEDD8-206ENST00000531430 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 CDIP1Q9H305 208 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 SMDT1Q9H4I9 107 aa5.47□□□□□ -1.53
NEDD8-206ENST00000531430 IGHV3OR16-9A0A0B4J2B5 98 aa5.46□□□□□ -1.54
NEDD8-206ENST00000531430 FAM231DQ6ZW35 169 aa5.46□□□□□ -1.54
NEDD8-206ENST00000531430 LINC00469Q8N7U9 141 aa5.46□□□□□ -1.54
NEDD8-206ENST00000531430 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
NEDD8-206ENST00000531430 CTDSP1Q9GZU7 261 aa5.46□□□□□ -1.54
NEDD8-206ENST00000531430 TGIF2-C20orf24A0A0A6YYL0 155 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 PPP1R2P9O14990 202 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 CRYGAP11844 174 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 CKS2P33552 79 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 HBBP68871 147 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 C9orf129Q5T035 196 aaKnown RBP5.45□□□□□ -1.54
NEDD8-206ENST00000531430 NRACQ8N912 160 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 ANAPC11Q9NYG5 84 aa5.45□□□□□ -1.54
NEDD8-206ENST00000531430 A0A087X002 238 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 NDUFC2-KCTD14E9PQ53 114 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 TCAPO15273 167 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 MRPL51Q4U2R6 128 aaKnown RBP5.44□□□□□ -1.54
NEDD8-206ENST00000531430 LBHQ53QV2 105 aaPredicted RBP5.44□□□□□ -1.54
NEDD8-206ENST00000531430 CT83Q5H943 113 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 BATF3Q9NR55 127 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 TOMM7Q9P0U1 55 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
NEDD8-206ENST00000531430 NUPR1O60356 82 aa5.43□□□□□ -1.54
NEDD8-206ENST00000531430 PRSS2P07478 247 aa5.43□□□□□ -1.54
NEDD8-206ENST00000531430 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
NEDD8-206ENST00000531430 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
NEDD8-206ENST00000531430 XAGE1AQ9HD64 81 aa5.43□□□□□ -1.54
NEDD8-206ENST00000531430 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 ZNF727A8MUV8 499 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 TMEM250H0YL14 139 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 CKS1BP61024 79 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 FAM104BQ5XKR9 115 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 SMIM7Q9BQ49 75 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 C20orf78Q9BR46 151 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 EIF5A2Q9GZV4 153 aaKnown RBP5.42□□□□□ -1.54
NEDD8-206ENST00000531430 SPANXA1Q9NS26 97 aa5.42□□□□□ -1.54
NEDD8-206ENST00000531430 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 RPL37AP8A6NKH3 93 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 TNFRSF6BO95407 300 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 RAB5AP20339 215 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 IFI27P40305 119 aaPredicted RBP5.41□□□□□ -1.54
NEDD8-206ENST00000531430 MRPS36P82909 103 aaKnown RBP5.41□□□□□ -1.54
NEDD8-206ENST00000531430 LINC01551Q86U37 167 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 SLC51BQ86UW2 128 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
NEDD8-206ENST00000531430 LINC00862A6NCI5 91 aa5.4□□□□□ -1.54
NEDD8-206ENST00000531430 GAGE10A6NGK3 116 aa5.4□□□□□ -1.54
NEDD8-206ENST00000531430 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.54
NEDD8-206ENST00000531430 NAT8BQ9UHF3 227 aa5.4□□□□□ -1.54
NEDD8-206ENST00000531430 BCE1O60756 84 aa5.39□□□□□ -1.55
NEDD8-206ENST00000531430 BLOC1S1P78537 153 aa5.39□□□□□ -1.55
NEDD8-206ENST00000531430 ZC2HC1BQ5TFG8 222 aa5.39□□□□□ -1.55
NEDD8-206ENST00000531430 MRPL55Q7Z7F7 128 aaKnown RBP5.39□□□□□ -1.55
NEDD8-206ENST00000531430 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
NEDD8-206ENST00000531430 ALKBH7Q9BT30 221 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-206ENST00000531430 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
NEDD8-206ENST00000531430 V9GYV3 84 aa5.39□□□□□ -1.55
NEDD8-206ENST00000531430 TRBV24-1A0A075B6N3 115 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 IGKV2D-26A0A0A0MRZ7 120 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 LOC389332A0A1B0GUA5 103 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 D6R8Y8 96 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 UBE2AP49459 152 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 ALKAL2Q6UX46 152 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 Q6ZN92 141 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 TEX43Q6ZNM6 134 aa5.38□□□□□ -1.55
NEDD8-206ENST00000531430 NPYP01303 97 aa5.37□□□□□ -1.55
NEDD8-206ENST00000531430 RPL32P62910 135 aaKnown RBP5.37□□□□□ -1.55
NEDD8-206ENST00000531430 FAM74A3Q4VXF1 159 aa5.37□□□□□ -1.55
NEDD8-206ENST00000531430 MRPL54Q6P161 138 aaKnown RBP5.37□□□□□ -1.55
NEDD8-206ENST00000531430 TMEM141Q96I45 108 aa5.37□□□□□ -1.55
NEDD8-206ENST00000531430 LINC00167Q96N53 147 aa5.37□□□□□ -1.55
NEDD8-206ENST00000531430 C2orf88Q9BSF0 95 aa5.37□□□□□ -1.55
NEDD8-206ENST00000531430 VCX2Q9H322 139 aa5.37□□□□□ -1.55
NEDD8-206ENST00000531430 IGLV4-3A0A075B6K6 122 aa5.36□□□□□ -1.55
NEDD8-206ENST00000531430 F8W036 122 aa5.36□□□□□ -1.55
NEDD8-206ENST00000531430 LINC01547P58512 204 aaPredicted RBP5.36□□□□□ -1.55
NEDD8-206ENST00000531430 ADIRFQ15847 76 aa5.36□□□□□ -1.55
NEDD8-206ENST00000531430 KRTAP13-2Q52LG2 175 aa5.36□□□□□ -1.55
NEDD8-206ENST00000531430 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
NEDD8-206ENST00000531430 SRP19P09132 144 aaKnown RBP5.35□□□□□ -1.55
NEDD8-206ENST00000531430 RAB5BP61020 215 aa5.35□□□□□ -1.55
NEDD8-206ENST00000531430 TMEM136Q6ZRR5 245 aa5.35□□□□□ -1.55
NEDD8-206ENST00000531430 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
NEDD8-206ENST00000531430 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms