RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 RIGQ13278 110 aa7.92□□□□□ -1.14
HIF3A-214ENST00000531043 SMIM7Q9BQ49 75 aa7.92□□□□□ -1.14
HIF3A-214ENST00000531043 SMDT1Q9H4I9 107 aa7.92□□□□□ -1.14
HIF3A-214ENST00000531043 M0QXV9 152 aa7.91□□□□□ -1.14
HIF3A-214ENST00000531043 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
HIF3A-214ENST00000531043 ALKAL2Q6UX46 152 aa7.91□□□□□ -1.14
HIF3A-214ENST00000531043 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
HIF3A-214ENST00000531043 UBE2D1P51668 147 aa7.9□□□□□ -1.14
HIF3A-214ENST00000531043 SMAGPQ0VAQ4 97 aa7.9□□□□□ -1.14
HIF3A-214ENST00000531043 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.14
HIF3A-214ENST00000531043 FAM104BQ5XKR9 115 aa7.9□□□□□ -1.14
HIF3A-214ENST00000531043 C2orf82Q6UX34 121 aa7.9□□□□□ -1.14
HIF3A-214ENST00000531043 ZNF727A8MUV8 499 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 F8WDY8 70 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 PPP1R2P9O14990 202 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 TSPAN13O95857 204 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 PPP1R17O96001 155 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 UBE2BP63146 152 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 TMEM241Q24JQ0 296 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 TMEM18Q96B42 140 aa7.89□□□□□ -1.15
HIF3A-214ENST00000531043 IFITM10A6NMD0 228 aa7.88□□□□□ -1.15
HIF3A-214ENST00000531043 TCAPO15273 167 aa7.88□□□□□ -1.15
HIF3A-214ENST00000531043 SRP19P09132 144 aaKnown RBP7.88□□□□□ -1.15
HIF3A-214ENST00000531043 BLOC1S1P78537 153 aa7.88□□□□□ -1.15
HIF3A-214ENST00000531043 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
HIF3A-214ENST00000531043 TNFRSF6BO95407 300 aa7.87□□□□□ -1.15
HIF3A-214ENST00000531043 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
HIF3A-214ENST00000531043 HBBP68871 147 aa7.87□□□□□ -1.15
HIF3A-214ENST00000531043 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
HIF3A-214ENST00000531043 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
HIF3A-214ENST00000531043 C20orf78Q9BR46 151 aa7.87□□□□□ -1.15
HIF3A-214ENST00000531043 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
HIF3A-214ENST00000531043 SPANXA1Q9NS26 97 aa7.87□□□□□ -1.15
HIF3A-214ENST00000531043 NPYP01303 97 aa7.86□□□□□ -1.15
HIF3A-214ENST00000531043 CKS2P33552 79 aa7.86□□□□□ -1.15
HIF3A-214ENST00000531043 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
HIF3A-214ENST00000531043 LINC00242Q5T6M2 205 aa7.86□□□□□ -1.15
HIF3A-214ENST00000531043 EIF5A2Q9GZV4 153 aaKnown RBP7.86□□□□□ -1.15
HIF3A-214ENST00000531043 D6R8Y8 96 aa7.85□□□□□ -1.15
HIF3A-214ENST00000531043 FAM74A3Q4VXF1 159 aa7.85□□□□□ -1.15
HIF3A-214ENST00000531043 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
HIF3A-214ENST00000531043 A0A087X002 238 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 SMIM27A0A1W2PRY6 76 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 LINC00862A6NCI5 91 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 NDUFC2-KCTD14E9PQ53 114 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 ZNF861PO60384 105 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 RPL23P62829 140 aaKnown RBP7.84□□□□□ -1.15
HIF3A-214ENST00000531043 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 LINC00469Q8N7U9 141 aa7.84□□□□□ -1.15
HIF3A-214ENST00000531043 CARHSP1Q9Y2V2 147 aaKnown RBP7.84□□□□□ -1.15
HIF3A-214ENST00000531043 IGLV4-3A0A075B6K6 122 aa7.83□□□□□ -1.16
HIF3A-214ENST00000531043 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
HIF3A-214ENST00000531043 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
HIF3A-214ENST00000531043 C9JQL5 133 aa7.83□□□□□ -1.16
HIF3A-214ENST00000531043 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
HIF3A-214ENST00000531043 MRPL54Q6P161 138 aaKnown RBP7.82□□□□□ -1.16
HIF3A-214ENST00000531043 C22orf24Q9Y442 160 aa7.82□□□□□ -1.16
HIF3A-214ENST00000531043 ADIRFQ15847 76 aa7.81□□□□□ -1.16
HIF3A-214ENST00000531043 CTDSP1Q9GZU7 261 aa7.81□□□□□ -1.16
HIF3A-214ENST00000531043 KRTAP9-6A0A140TA67 174 aa7.8□□□□□ -1.16
HIF3A-214ENST00000531043 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
HIF3A-214ENST00000531043 PACRGQ96M98 296 aaPredicted RBP7.8□□□□□ -1.16
HIF3A-214ENST00000531043 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
HIF3A-214ENST00000531043 ANAPC11Q9NYG5 84 aa7.8□□□□□ -1.16
HIF3A-214ENST00000531043 IFI27P40305 119 aaPredicted RBP7.79□□□□□ -1.16
HIF3A-214ENST00000531043 LINC00173Q6ZV60 143 aa7.79□□□□□ -1.16
HIF3A-214ENST00000531043 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
HIF3A-214ENST00000531043 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
HIF3A-214ENST00000531043 SRSF3P84103 164 aaKnown RBP7.78□□□□□ -1.16
HIF3A-214ENST00000531043 TMEM141Q96I45 108 aa7.78□□□□□ -1.16
HIF3A-214ENST00000531043 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
HIF3A-214ENST00000531043 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
HIF3A-214ENST00000531043 A0A1B0GW15 77 aa7.77□□□□□ -1.17
HIF3A-214ENST00000531043 NUPR1O60356 82 aa7.77□□□□□ -1.17
HIF3A-214ENST00000531043 RAB5AP20339 215 aa7.76□□□□□ -1.17
HIF3A-214ENST00000531043 KRTAP13-2Q52LG2 175 aa7.76□□□□□ -1.17
HIF3A-214ENST00000531043 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
HIF3A-214ENST00000531043 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
HIF3A-214ENST00000531043 NAT8Q9UHE5 227 aa7.76□□□□□ -1.17
HIF3A-214ENST00000531043 LOC389332A0A1B0GUA5 103 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 F8W036 122 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 BCE1O60756 84 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 PPBPP02775 128 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 CRYGAP11844 174 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 TEX43Q6ZNM6 134 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 AKAP14Q86UN6 197 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 ORMDL3Q8N138 153 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 PRELID3AQ96N28 172 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 AMELXQ99217 191 aa7.75□□□□□ -1.17
HIF3A-214ENST00000531043 hCG_2014768A0A024R1R8 64 aa7.74□□□□□ -1.17
HIF3A-214ENST00000531043 RPL37AP8A6NKH3 93 aa7.74□□□□□ -1.17
HIF3A-214ENST00000531043 PRSS2P07478 247 aa7.74□□□□□ -1.17
HIF3A-214ENST00000531043 CKS1BP61024 79 aa7.74□□□□□ -1.17
HIF3A-214ENST00000531043 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
HIF3A-214ENST00000531043 MRPL55Q7Z7F7 128 aaKnown RBP7.74□□□□□ -1.17
HIF3A-214ENST00000531043 RPL28P46779 137 aaKnown RBP7.73□□□□□ -1.17
HIF3A-214ENST00000531043 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
HIF3A-214ENST00000531043 Q6ZN92 141 aa7.73□□□□□ -1.17
HIF3A-214ENST00000531043 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms