RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 HIST1H2BHQ93079 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 UBE2WQ96B02 151 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BNQ99877 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 HIST1H2BMQ99879 126 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 GEMIN7Q9H840 131 aaKnown RBP3.27□□□□□ -1.89
SSBP3-213ENST00000530618 KLK12Q9UKR0 248 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 PKIGQ9Y2B9 76 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 UBE2D4Q9Y2X8 147 aa3.27□□□□□ -1.89
SSBP3-213ENST00000530618 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 IBA57-AS1B1ANH7 110 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 H3BRM9 83 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 GAS8-AS1O95177 125 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 APOMO95445 188 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 MALP21145 153 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 HERVK_113P63121 156 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 REG3AQ06141 175 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 PMVKQ15126 192 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 C1orf134Q5TEV5 83 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 LINC00269Q8N2A0 174 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 IFI27L1Q96BM0 104 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 CDC42SE2Q9NRR3 84 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 Q9UF83 564 aa3.26□□□□□ -1.89
SSBP3-213ENST00000530618 IGKV2D-24A0A075B6R9 120 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 TRAV13-1A0A0B4J241 112 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 PLNP26678 52 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 HERVK_113P61574 105 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 RPL39P62891 51 aaKnown RBP3.25□□□□□ -1.89
SSBP3-213ENST00000530618 COA6Q5JTJ3 125 aaKnown RBP3.25□□□□□ -1.89
SSBP3-213ENST00000530618 LINC00336Q6ZUF6 198 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 C6orf223Q8N319 242 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 Q8N976 141 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 Q9HAA7 133 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
SSBP3-213ENST00000530618 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
SSBP3-213ENST00000530618 IGLV4-3A0A075B6K6 122 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 TRAV12-1A0A0B4J245 112 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 IGIPA6NJ69 53 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 H0Y8G0 127 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 COX7A2LO14548 114 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 PRSS2P07478 247 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 FABP4P15090 132 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 PMCHL1Q16048 86 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 SFTA2Q6UW10 78 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 CLPSL2Q6UWE3 100 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 CD164L2Q6UWJ8 174 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 Q6ZUT4 128 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 DEFB104AQ8WTQ1 72 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 PRR34Q9NV39 138 aa3.24□□□□□ -1.89
SSBP3-213ENST00000530618 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.23□□□□□ -1.89
SSBP3-213ENST00000530618 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 TINCRA0A1B0GVN0 87 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 PRSS29PA6NIE9 313 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 F8VRH5 84 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 M0R2N4 97 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 GCSHP23434 173 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 XCL1P47992 114 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 KRTDAPP60985 99 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 PDZD11Q5EBL8 140 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 PET117Q6UWS5 81 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 LINC01561Q8N1V8 128 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 FAM19A2Q8N3H0 131 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 BAALCQ8WXS3 180 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 CHCHD10Q8WYQ3 142 aaPredicted RBP3.23□□□□□ -1.89
SSBP3-213ENST00000530618 AMELXQ99217 191 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 CST9LQ9H4G1 147 aa3.23□□□□□ -1.89
SSBP3-213ENST00000530618 CHTOPQ9Y3Y2 248 aaKnown RBP3.23□□□□□ -1.89
SSBP3-213ENST00000530618 FLG2Q5D862 2391 aaPredicted RBP3.22□□□□□ -1.89
SSBP3-213ENST00000530618 IGLV10-54A0A075B6I4 117 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 IGHV1-58A0A0C4DH39 117 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 GAGE12HA6NDE8 117 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 F8WDY8 70 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 ZNF561-AS1K7EIQ3 104 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 DPM2O94777 84 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 IGKCP01834 107 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 CXCL5P42830 114 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 UBE2D1P51668 147 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 SNRPEP62304 92 aaKnown RBP3.22□□□□□ -1.89
SSBP3-213ENST00000530618 TMEM170BQ5T4T1 132 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 CHAC1Q9BUX1 264 aa3.22□□□□□ -1.89
SSBP3-213ENST00000530618 SRRM2Q9UQ35 2752 aaKnown RBP3.22□□□□□ -1.89
SSBP3-213ENST00000530618 TNXBP22105 4242 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 A0A096LNJ9 63 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 C5orf52A6NGY3 159 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 LINC00587B1AMM8 73 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 SYS1-DBNDD2H3BUS1 97 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 IGLC3P0DOY3 106 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 CKS1BP61024 79 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 TNP2Q05952 138 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 RNASE13Q5GAN3 156 aaKnown RBP3.21□□□□□ -1.9
SSBP3-213ENST00000530618 ENHOQ6UWT2 76 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 SPATA12Q7Z6I5 190 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 HIST3H2BBQ8N257 126 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 OR10D4PQ8NGN7 298 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 URB1-AS1Q96HZ7 61 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms