RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CBLN2Q8IUK8 224 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 SMIM12Q96EX1 92 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 MANBALQ9NQG1 85 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 SMCO4Q9NRQ5 59 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 MUC2Q02817 5179 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 COX7A2LO14548 114 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 MT-ND4LP03901 98 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 CTRLP40313 264 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 RPL13AP40429 203 aaKnown RBP5.44□□□□□ -1.54
VPS11-203ENST00000529545 NUP35Q8NFH5 326 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 C11orf52Q96A22 123 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 RPL39LQ96EH5 51 aaKnown RBP5.44□□□□□ -1.54
VPS11-203ENST00000529545 MRAP2Q96G30 205 aa5.44□□□□□ -1.54
VPS11-203ENST00000529545 C1orf196B1AJZ1 125 aa5.43□□□□□ -1.54
VPS11-203ENST00000529545 LINC00587B1AMM8 73 aa5.43□□□□□ -1.54
VPS11-203ENST00000529545 CCL20P78556 96 aa5.43□□□□□ -1.54
VPS11-203ENST00000529545 C2orf48Q96LS8 159 aa5.43□□□□□ -1.54
VPS11-203ENST00000529545 SMDT1Q9H4I9 107 aa5.43□□□□□ -1.54
VPS11-203ENST00000529545 GNG13Q9P2W3 67 aa5.43□□□□□ -1.54
VPS11-203ENST00000529545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.42□□□□□ -1.54
VPS11-203ENST00000529545 S100PP25815 95 aa5.42□□□□□ -1.54
VPS11-203ENST00000529545 MEF2BQ02080 365 aaPredicted RBP5.42□□□□□ -1.54
VPS11-203ENST00000529545 SMAGPQ0VAQ4 97 aa5.42□□□□□ -1.54
VPS11-203ENST00000529545 LINC00469Q8N7U9 141 aa5.42□□□□□ -1.54
VPS11-203ENST00000529545 CNFNQ9BYD5 112 aa5.42□□□□□ -1.54
VPS11-203ENST00000529545 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
VPS11-203ENST00000529545 PCP4L1A6NKN8 68 aa5.41□□□□□ -1.54
VPS11-203ENST00000529545 GATCO43716 136 aaKnown RBP5.41□□□□□ -1.54
VPS11-203ENST00000529545 ESDP10768 282 aa5.41□□□□□ -1.54
VPS11-203ENST00000529545 RAB5BP61020 215 aa5.41□□□□□ -1.54
VPS11-203ENST00000529545 SNRPEP62304 92 aaKnown RBP5.41□□□□□ -1.54
VPS11-203ENST00000529545 MRPL52Q86TS9 123 aaKnown RBP5.41□□□□□ -1.54
VPS11-203ENST00000529545 IMMP2LQ96T52 175 aa5.41□□□□□ -1.54
VPS11-203ENST00000529545 OPRPNQ99935 248 aaPredicted RBP5.41□□□□□ -1.54
VPS11-203ENST00000529545 ST20Q9HBF5 79 aa5.41□□□□□ -1.54
VPS11-203ENST00000529545 TMEM242Q9NWH2 141 aa5.41□□□□□ -1.54
VPS11-203ENST00000529545 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 TRBV6-5A0A0K0K1A5 114 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 C7orf77A4D0Y5 90 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 PDE6DO43924 150 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 TSHBP01222 138 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 AKR1D1P51857 326 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 SPAG11BQ08648 103 aa5.4□□□□□ -1.54
VPS11-203ENST00000529545 RPP21Q9H633 154 aaKnown RBP5.4□□□□□ -1.54
VPS11-203ENST00000529545 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
VPS11-203ENST00000529545 RAB5AP20339 215 aa5.39□□□□□ -1.55
VPS11-203ENST00000529545 UBE2BP63146 152 aa5.39□□□□□ -1.55
VPS11-203ENST00000529545 C5orf38Q86SI9 138 aa5.39□□□□□ -1.55
VPS11-203ENST00000529545 TRAV13-1A0A0B4J241 112 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 IFITM10A6NMD0 228 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 F8WDY8 70 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 FCER1GP30273 86 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 FOXA3P55318 350 aaPredicted RBP5.38□□□□□ -1.55
VPS11-203ENST00000529545 RHEBQ15382 184 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 FAM19A5Q7Z5A7 132 aaPredicted RBP5.38□□□□□ -1.55
VPS11-203ENST00000529545 OR10D4PQ8NGN7 298 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 BORCS7Q96B45 105 aa5.38□□□□□ -1.55
VPS11-203ENST00000529545 MRPL35Q9NZE8 188 aaKnown RBP5.38□□□□□ -1.55
VPS11-203ENST00000529545 TRBV20OR9-2A0A075B6H5 130 aa5.37□□□□□ -1.55
VPS11-203ENST00000529545 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
VPS11-203ENST00000529545 NDUFA1O15239 70 aa5.37□□□□□ -1.55
VPS11-203ENST00000529545 TSPAN13O95857 204 aa5.37□□□□□ -1.55
VPS11-203ENST00000529545 TMEM241Q24JQ0 296 aa5.37□□□□□ -1.55
VPS11-203ENST00000529545 RNASE7Q9H1E1 156 aaKnown RBP5.37□□□□□ -1.55
VPS11-203ENST00000529545 CSDC2Q9Y534 153 aaKnown RBP5.37□□□□□ -1.55
VPS11-203ENST00000529545 TRBV27A0A0K0K1C4 114 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 A8MWL6 223 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 VCYO14598 125 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 SRP19P09132 144 aaKnown RBP5.36□□□□□ -1.55
VPS11-203ENST00000529545 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
VPS11-203ENST00000529545 FABP9Q0Z7S8 132 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 GAGE2EQ4V326 116 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 RNASE13Q5GAN3 156 aaKnown RBP5.36□□□□□ -1.55
VPS11-203ENST00000529545 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 TMEM18Q96B42 140 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 GAGE2DQ9UEU5 116 aa5.36□□□□□ -1.55
VPS11-203ENST00000529545 M0QXV9 152 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 S100A6P06703 90 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 TLX1NBP0CAT3 122 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 KRTAP11-1Q8IUC1 163 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 RPS10P5Q9NQ39 176 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 UBE2D4Q9Y2X8 147 aa5.35□□□□□ -1.55
VPS11-203ENST00000529545 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
VPS11-203ENST00000529545 PPP1R17O96001 155 aa5.34□□□□□ -1.55
VPS11-203ENST00000529545 TAGLN2P37802 199 aaKnown RBP5.34□□□□□ -1.55
VPS11-203ENST00000529545 PYY3Q5JQD4 70 aa5.34□□□□□ -1.55
VPS11-203ENST00000529545 OCC1Q8TAD7 63 aa5.34□□□□□ -1.55
VPS11-203ENST00000529545 K7EN84 100 aa5.33□□□□□ -1.56
VPS11-203ENST00000529545 ZNF861PO60384 105 aa5.33□□□□□ -1.56
VPS11-203ENST00000529545 COA6Q5JTJ3 125 aaKnown RBP5.33□□□□□ -1.56
VPS11-203ENST00000529545 UNQ6190/PRO20217Q6UXQ8 127 aa5.33□□□□□ -1.56
VPS11-203ENST00000529545 Q6ZUT4 128 aa5.33□□□□□ -1.56
VPS11-203ENST00000529545 TIMM21Q9BVV7 248 aa5.33□□□□□ -1.56
VPS11-203ENST00000529545 TMEM191AQ9H0A3 160 aa5.33□□□□□ -1.56
VPS11-203ENST00000529545 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
VPS11-203ENST00000529545 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
VPS11-203ENST00000529545 HIST3H2BBQ8N257 126 aa5.32□□□□□ -1.56
VPS11-203ENST00000529545 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms