RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 UBE2D3P61077 147 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 UBE2D2P62837 147 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 MRPS36P82909 103 aaKnown RBP5.91□□□□□ -1.46
CTNND1-220ENST00000529526 PRR4Q16378 134 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 C7orf33Q8WU49 177 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 ATP5EP2Q5VTU8 51 aa5.9□□□□□ -1.46
CTNND1-220ENST00000529526 PRR15LQ9BU68 103 aa5.9□□□□□ -1.46
CTNND1-220ENST00000529526 IGHV4-30-4P0DP06 118 aa5.9□□□□□ -1.46
CTNND1-220ENST00000529526 CDC42SE2Q9NRR3 84 aa5.9□□□□□ -1.46
CTNND1-220ENST00000529526 PLA2G2AP14555 144 aa5.9□□□□□ -1.47
CTNND1-220ENST00000529526 HCFC1P51610 2035 aa5.9□□□□□ -1.47
CTNND1-220ENST00000529526 LST1O00453 97 aa5.9□□□□□ -1.47
CTNND1-220ENST00000529526 LOC107984640A0A0U1RRK4 108 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 COX6A2Q02221 97 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-220ENST00000529526 HIVEP2P31629 2446 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 PRR14LQ5THK1 2151 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 CYSRT1A8MQ03 144 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 DHRS4-AS1Q9P1J3 65 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 PLAC8L1A1L4L8 177 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 ZNF73O43830 326 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-220ENST00000529526 PTPRSQ13332 1948 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 ODF3L2Q3SX64 289 aa5.89□□□□□ -1.47
CTNND1-220ENST00000529526 IGIPA6NJ69 53 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 MRGPRG-AS1Q2M3A8 158 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 URB1-AS1Q96HZ7 61 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 LRP4O75096 1905 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 A6NED7 52 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 LINC00310P59036 64 aa5.88□□□□□ -1.47
CTNND1-220ENST00000529526 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 Q8IZM0 81 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 BRI3O95415 125 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 COX17Q14061 63 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 LINC00242Q5T6M2 205 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 PRR3P79522 188 aaKnown RBP5.87□□□□□ -1.47
CTNND1-220ENST00000529526 CHCHD7Q9BUK0 85 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 CNFNQ9BYD5 112 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 RAI1Q7Z5J4 1906 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-220ENST00000529526 LINC00694P0DN24 101 aa5.87□□□□□ -1.47
CTNND1-220ENST00000529526 IGLV4-60A0A075B6I1 120 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 TSPEAR-AS2P59090 65 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 A0A1W2PPR1 153 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 PLXNB1O43157 2135 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 OTOGLQ3ZCN5 2332 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 C10orf142B7Z368 130 aa5.86□□□□□ -1.47
CTNND1-220ENST00000529526 ZNF706Q9Y5V0 76 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-220ENST00000529526 XGP55808 180 aa5.85□□□□□ -1.47
CTNND1-220ENST00000529526 ZNF580Q9UK33 172 aa5.85□□□□□ -1.47
CTNND1-220ENST00000529526 ARHGAP32A7KAX9 2087 aa5.85□□□□□ -1.47
CTNND1-220ENST00000529526 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
CTNND1-220ENST00000529526 Q6ZSN1 163 aa5.84□□□□□ -1.47
CTNND1-220ENST00000529526 A0A087WYN8 130 aa5.84□□□□□ -1.47
CTNND1-220ENST00000529526 SERP2Q8N6R1 65 aa5.84□□□□□ -1.47
CTNND1-220ENST00000529526 M0QXV9 152 aa5.84□□□□□ -1.47
CTNND1-220ENST00000529526 FAM19A3Q7Z5A8 133 aa5.84□□□□□ -1.47
CTNND1-220ENST00000529526 BDP1A6H8Y1 2624 aa5.84□□□□□ -1.48
CTNND1-220ENST00000529526 ANKHD1Q8IWZ3 2542 aaKnown RBP5.84□□□□□ -1.48
CTNND1-220ENST00000529526 CPAMD8Q8IZJ3 1885 aa5.84□□□□□ -1.48
CTNND1-220ENST00000529526 FHL2Q14192 279 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 CELA1Q9UNI1 258 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 TRBV10-3A0A0K0K1G6 114 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
CTNND1-220ENST00000529526 C6orf223Q8N319 242 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 IGLV1-51P01701 117 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 Q6ZTC4 211 aa5.83□□□□□ -1.48
CTNND1-220ENST00000529526 WNK1Q9H4A3 2382 aa5.82□□□□□ -1.48
CTNND1-220ENST00000529526 C10orf25Q5T742 122 aa5.82□□□□□ -1.48
CTNND1-220ENST00000529526 Q8N814 137 aa5.82□□□□□ -1.48
CTNND1-220ENST00000529526 SPG11Q96JI7 2443 aa5.81□□□□□ -1.48
CTNND1-220ENST00000529526 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
CTNND1-220ENST00000529526 NTM-AS1Q6ZSK4 140 aa5.81□□□□□ -1.48
CTNND1-220ENST00000529526 EML5Q05BV3 1969 aa5.81□□□□□ -1.48
CTNND1-220ENST00000529526 LINC00474Q9P2X8 69 aa5.81□□□□□ -1.48
CTNND1-220ENST00000529526 COX7CP15954 63 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 IMUPQ9GZP8 106 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 Q6JHZ5 121 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 CSPG4Q6UVK1 2322 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 CIRBP-AS1Q8TBR5 109 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 RETNLBQ9BQ08 111 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 A0A087WVE0 104 aa5.8□□□□□ -1.48
CTNND1-220ENST00000529526 EGFEM1PQ0D2K5 195 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 CUL9Q8IWT3 2517 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 ESRGQ1W209 222 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 Q8N9L7 120 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 A0A096LNJ9 63 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 NDUFC1O43677 76 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
CTNND1-220ENST00000529526 AMELXQ99217 191 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 EXPH5Q8NEV8 1989 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 TTC28Q96AY4 2481 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 RPL28P46779 137 aaKnown RBP5.78□□□□□ -1.48
CTNND1-220ENST00000529526 C16orf95Q9H693 158 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 ADAMTS20P59510 1910 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 NUPR2A6NF83 97 aa5.78□□□□□ -1.48
CTNND1-220ENST00000529526 IGLV5-52A0A0A0MRZ9 124 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms