RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
SSRP1-204ENST00000529002 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
SSRP1-204ENST00000529002 CRYGAP11844 174 aa11.01□□□□□ -0.65
SSRP1-204ENST00000529002 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
SSRP1-204ENST00000529002 TPRXLQ17RH7 258 aa11.01□□□□□ -0.65
SSRP1-204ENST00000529002 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
SSRP1-204ENST00000529002 IGLV7-46A0A075B6I9 117 aa11□□□□□ -0.65
SSRP1-204ENST00000529002 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
SSRP1-204ENST00000529002 NRACQ8N912 160 aa10.99□□□□□ -0.65
SSRP1-204ENST00000529002 SMAGPQ0VAQ4 97 aa10.98□□□□□ -0.65
SSRP1-204ENST00000529002 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
SSRP1-204ENST00000529002 A8MWL6 223 aa10.97□□□□□ -0.65
SSRP1-204ENST00000529002 NDUFC2-KCTD14E9PQ53 114 aa10.97□□□□□ -0.65
SSRP1-204ENST00000529002 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
SSRP1-204ENST00000529002 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
SSRP1-204ENST00000529002 LINC00469Q8N7U9 141 aa10.97□□□□□ -0.65
SSRP1-204ENST00000529002 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
SSRP1-204ENST00000529002 NUPR1O60356 82 aa10.96□□□□□ -0.65
SSRP1-204ENST00000529002 KIR2DL4Q99706 377 aa10.96□□□□□ -0.65
SSRP1-204ENST00000529002 A0A1B0GUT8 65 aa10.95□□□□□ -0.66
SSRP1-204ENST00000529002 LINC00173Q6ZV60 143 aa10.95□□□□□ -0.66
SSRP1-204ENST00000529002 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
SSRP1-204ENST00000529002 TRBV30A0A0K0K1B3 111 aa10.94□□□□□ -0.66
SSRP1-204ENST00000529002 HMSDA8MTL9 139 aa10.94□□□□□ -0.66
SSRP1-204ENST00000529002 HIGD1CA8MV81 97 aa10.94□□□□□ -0.66
SSRP1-204ENST00000529002 TEX46H3BTG2 121 aa10.94□□□□□ -0.66
SSRP1-204ENST00000529002 LINC01547P58512 204 aaPredicted RBP10.94□□□□□ -0.66
SSRP1-204ENST00000529002 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
SSRP1-204ENST00000529002 KRTAP4-1Q9BYQ7 146 aa10.94□□□□□ -0.66
SSRP1-204ENST00000529002 IFITM10A6NMD0 228 aa10.93□□□□□ -0.66
SSRP1-204ENST00000529002 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
SSRP1-204ENST00000529002 TMEM18Q96B42 140 aa10.93□□□□□ -0.66
SSRP1-204ENST00000529002 XAGE1AQ9HD64 81 aa10.93□□□□□ -0.66
SSRP1-204ENST00000529002 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
SSRP1-204ENST00000529002 PACRGQ96M98 296 aaPredicted RBP10.91□□□□□ -0.66
SSRP1-204ENST00000529002 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
SSRP1-204ENST00000529002 BCE1O60756 84 aa10.9□□□□□ -0.66
SSRP1-204ENST00000529002 HBBP68871 147 aa10.9□□□□□ -0.66
SSRP1-204ENST00000529002 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
SSRP1-204ENST00000529002 SRSF3P84103 164 aaKnown RBP10.89□□□□□ -0.67
SSRP1-204ENST00000529002 CT83Q5H943 113 aa10.89□□□□□ -0.67
SSRP1-204ENST00000529002 ZNF727A8MUV8 499 aa10.88□□□□□ -0.67
SSRP1-204ENST00000529002 MRPS36P82909 103 aaKnown RBP10.88□□□□□ -0.67
SSRP1-204ENST00000529002 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
SSRP1-204ENST00000529002 SPANXA1Q9NS26 97 aa10.88□□□□□ -0.67
SSRP1-204ENST00000529002 RPL37AP8A6NKH3 93 aa10.87□□□□□ -0.67
SSRP1-204ENST00000529002 LBHQ53QV2 105 aaPredicted RBP10.87□□□□□ -0.67
SSRP1-204ENST00000529002 PPP1R2P9O14990 202 aa10.86□□□□□ -0.67
SSRP1-204ENST00000529002 PPP1R17O96001 155 aa10.86□□□□□ -0.67
SSRP1-204ENST00000529002 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
SSRP1-204ENST00000529002 TCAPO15273 167 aa10.85□□□□□ -0.67
SSRP1-204ENST00000529002 CEBPGP53567 150 aa10.85□□□□□ -0.67
SSRP1-204ENST00000529002 RIGQ13278 110 aa10.83□□□□□ -0.68
SSRP1-204ENST00000529002 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
SSRP1-204ENST00000529002 LINC00167Q96N53 147 aa10.83□□□□□ -0.68
SSRP1-204ENST00000529002 TOMM7Q9P0U1 55 aa10.83□□□□□ -0.68
SSRP1-204ENST00000529002 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
SSRP1-204ENST00000529002 FAM104BQ5XKR9 115 aa10.82□□□□□ -0.68
SSRP1-204ENST00000529002 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
SSRP1-204ENST00000529002 C20orf78Q9BR46 151 aa10.82□□□□□ -0.68
SSRP1-204ENST00000529002 TNFRSF6BO95407 300 aa10.81□□□□□ -0.68
SSRP1-204ENST00000529002 TAGLN2P37802 199 aaKnown RBP10.81□□□□□ -0.68
SSRP1-204ENST00000529002 FAM229BQ4G0N7 80 aa10.81□□□□□ -0.68
SSRP1-204ENST00000529002 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
SSRP1-204ENST00000529002 TP73-AS1Q9UF72 201 aa10.81□□□□□ -0.68
SSRP1-204ENST00000529002 TRBV24-1A0A075B6N3 115 aa10.8□□□□□ -0.68
SSRP1-204ENST00000529002 IGKV2D-26A0A0A0MRZ7 120 aa10.8□□□□□ -0.68
SSRP1-204ENST00000529002 ASB16-AS1Q495Z4 193 aa10.8□□□□□ -0.68
SSRP1-204ENST00000529002 IGLV4-3A0A075B6K6 122 aa10.79□□□□□ -0.68
SSRP1-204ENST00000529002 TMEM250H0YL14 139 aa10.79□□□□□ -0.68
SSRP1-204ENST00000529002 CKS2P33552 79 aa10.79□□□□□ -0.68
SSRP1-204ENST00000529002 RPL32P62910 135 aaKnown RBP10.79□□□□□ -0.68
SSRP1-204ENST00000529002 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
SSRP1-204ENST00000529002 BATF3Q9NR55 127 aa10.79□□□□□ -0.68
SSRP1-204ENST00000529002 V9GYV3 84 aa10.79□□□□□ -0.68
SSRP1-204ENST00000529002 NPYP01303 97 aa10.78□□□□□ -0.68
SSRP1-204ENST00000529002 UBE2AP49459 152 aa10.78□□□□□ -0.68
SSRP1-204ENST00000529002 CKS1BP61024 79 aa10.78□□□□□ -0.68
SSRP1-204ENST00000529002 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
SSRP1-204ENST00000529002 OSTCQ9NRP0 149 aa10.78□□□□□ -0.68
SSRP1-204ENST00000529002 PRSS2P07478 247 aa10.77□□□□□ -0.69
SSRP1-204ENST00000529002 IFI27P40305 119 aaPredicted RBP10.76□□□□□ -0.69
SSRP1-204ENST00000529002 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
SSRP1-204ENST00000529002 C6orf226Q5I0X4 101 aa10.76□□□□□ -0.69
SSRP1-204ENST00000529002 LINC00337Q8N6G1 96 aa10.76□□□□□ -0.69
SSRP1-204ENST00000529002 LINC00862A6NCI5 91 aa10.75□□□□□ -0.69
SSRP1-204ENST00000529002 D6R8Y8 96 aa10.75□□□□□ -0.69
SSRP1-204ENST00000529002 RGS21Q2M5E4 152 aa10.75□□□□□ -0.69
SSRP1-204ENST00000529002 SMIM7Q9BQ49 75 aa10.75□□□□□ -0.69
SSRP1-204ENST00000529002 SCO1O75880 301 aa10.74□□□□□ -0.69
SSRP1-204ENST00000529002 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
SSRP1-204ENST00000529002 LINC01561Q8N1V8 128 aa10.74□□□□□ -0.69
SSRP1-204ENST00000529002 TMEM141Q96I45 108 aa10.74□□□□□ -0.69
SSRP1-204ENST00000529002 PRLHP81277 87 aa10.73□□□□□ -0.69
SSRP1-204ENST00000529002 PNRC1Q12796 327 aaPredicted RBP10.73□□□□□ -0.69
SSRP1-204ENST00000529002 Q6ZN92 141 aa10.73□□□□□ -0.69
SSRP1-204ENST00000529002 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
SSRP1-204ENST00000529002 EIF5A2Q9GZV4 153 aaKnown RBP10.73□□□□□ -0.69
SSRP1-204ENST00000529002 Q8IZM0 81 aa10.72□□□□□ -0.69
SSRP1-204ENST00000529002 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms