RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 K7EMT4 169 aa13.12□□□□□ -0.31
LTBP3-210ENST00000528516 LINC00315P59091 139 aa13.12□□□□□ -0.31
LTBP3-210ENST00000528516 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
LTBP3-210ENST00000528516 IMUPQ9GZP8 106 aa13.12□□□□□ -0.31
LTBP3-210ENST00000528516 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
LTBP3-210ENST00000528516 KIF25-AS1Q9Y6Z4 181 aa13.11□□□□□ -0.31
LTBP3-210ENST00000528516 BSNQ9UPA5 3926 aa13.11□□□□□ -0.31
LTBP3-210ENST00000528516 M0QY20 66 aa13.1□□□□□ -0.31
LTBP3-210ENST00000528516 LINC00526Q96FQ7 95 aa13.1□□□□□ -0.31
LTBP3-210ENST00000528516 A0A1B0GX51 115 aa13.1□□□□□ -0.31
LTBP3-210ENST00000528516 Q9HAA7 133 aa13.1□□□□□ -0.31
LTBP3-210ENST00000528516 SDIM1Q6ZPB5 146 aa13.1□□□□□ -0.31
LTBP3-210ENST00000528516 J3QLI3 93 aa13.09□□□□□ -0.31
LTBP3-210ENST00000528516 SS18Q15532 418 aa13.09□□□□□ -0.31
LTBP3-210ENST00000528516 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
LTBP3-210ENST00000528516 COX7CP15954 63 aa13.09□□□□□ -0.31
LTBP3-210ENST00000528516 DAD1P61803 113 aa13.08□□□□□ -0.31
LTBP3-210ENST00000528516 GYPEP15421 78 aa13.08□□□□□ -0.32
LTBP3-210ENST00000528516 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.32
LTBP3-210ENST00000528516 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
LTBP3-210ENST00000528516 NBEAL1Q6ZS30 2694 aa13.08□□□□□ -0.32
LTBP3-210ENST00000528516 DEFB121Q5J5C9 76 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 LRRC75A-AS1Q8N1F1 130 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 POM121L12Q8N7R1 296 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 SMCR5Q8TEV8 140 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 ATOX1O00244 68 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 ATP5G1P05496 136 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 VSIG2Q96IQ7 327 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
LTBP3-210ENST00000528516 DEFB135Q30KP9 77 aa13.06□□□□□ -0.32
LTBP3-210ENST00000528516 PIK3CD-AS1Q5SR53 167 aa13.06□□□□□ -0.32
LTBP3-210ENST00000528516 TEX15Q9BXT5 2789 aa13.06□□□□□ -0.32
LTBP3-210ENST00000528516 TRBV6-5A0A0K0K1A5 114 aa13.06□□□□□ -0.32
LTBP3-210ENST00000528516 COX7A2LO14548 114 aa13.05□□□□□ -0.32
LTBP3-210ENST00000528516 DCANP1Q8TF63 244 aa13.05□□□□□ -0.32
LTBP3-210ENST00000528516 TIRAPP58753 221 aa13.05□□□□□ -0.32
LTBP3-210ENST00000528516 SND1-IT1Q9HBX3 110 aa13.04□□□□□ -0.32
LTBP3-210ENST00000528516 UBR5O95071 2799 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-210ENST00000528516 LITAFQ99732 161 aa13.04□□□□□ -0.32
LTBP3-210ENST00000528516 PSMB8P28062 276 aa13.04□□□□□ -0.32
LTBP3-210ENST00000528516 MIR7-3HGQ8N6C7 128 aa13.04□□□□□ -0.32
LTBP3-210ENST00000528516 DSCR8Q96T75 97 aa13.03□□□□□ -0.32
LTBP3-210ENST00000528516 LOC100131303A0A0U1RQF7 123 aa13.03□□□□□ -0.32
LTBP3-210ENST00000528516 K7EQD1 137 aa13.02□□□□□ -0.33
LTBP3-210ENST00000528516 DNAJC9-AS1A6NH13 148 aa13.01□□□□□ -0.33
LTBP3-210ENST00000528516 Q9UF83 564 aa13.01□□□□□ -0.33
LTBP3-210ENST00000528516 LINC00308Q8TCZ7 52 aa13.01□□□□□ -0.33
LTBP3-210ENST00000528516 ZANQ9Y493 2812 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 HAMPP81172 84 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 DEFB114Q30KQ6 69 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 LINC00482Q8N8I6 264 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 MRPS36P82909 103 aaKnown RBP13□□□□□ -0.33
LTBP3-210ENST00000528516 KIR2DL5BQ8NHK3 375 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 C14orf132Q9NPU4 83 aa13□□□□□ -0.33
LTBP3-210ENST00000528516 KLLNB2CW77 178 aa12.99□□□□□ -0.33
LTBP3-210ENST00000528516 PLA2G2AP14555 144 aa12.99□□□□□ -0.33
LTBP3-210ENST00000528516 RNF152Q8N8N0 203 aa12.99□□□□□ -0.33
LTBP3-210ENST00000528516 A0A087WVE0 104 aa12.99□□□□□ -0.33
LTBP3-210ENST00000528516 HRCT1Q6UXD1 115 aa12.98□□□□□ -0.33
LTBP3-210ENST00000528516 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
LTBP3-210ENST00000528516 SOCS3O14543 225 aa12.97□□□□□ -0.33
LTBP3-210ENST00000528516 DCHS2Q6V1P9 2916 aa12.97□□□□□ -0.33
LTBP3-210ENST00000528516 LECT2O14960 151 aa12.97□□□□□ -0.33
LTBP3-210ENST00000528516 Q8N2B8 174 aa12.97□□□□□ -0.33
LTBP3-210ENST00000528516 NOTCH1P46531 2555 aa12.96□□□□□ -0.34
LTBP3-210ENST00000528516 SLPIP03973 132 aa12.95□□□□□ -0.34
LTBP3-210ENST00000528516 IGLV1-40P01703 118 aa12.95□□□□□ -0.34
LTBP3-210ENST00000528516 RPL18AQ02543 176 aaKnown RBP12.95□□□□□ -0.34
LTBP3-210ENST00000528516 Q6YL49 198 aa12.95□□□□□ -0.34
LTBP3-210ENST00000528516 SMR3AQ99954 134 aa12.95□□□□□ -0.34
LTBP3-210ENST00000528516 CMC4P56277 68 aaPredicted RBP12.94□□□□□ -0.34
LTBP3-210ENST00000528516 CXCL5P42830 114 aa12.94□□□□□ -0.34
LTBP3-210ENST00000528516 LINC01600Q96MT4 127 aa12.94□□□□□ -0.34
LTBP3-210ENST00000528516 ZNF702PQ9H963 129 aa12.94□□□□□ -0.34
LTBP3-210ENST00000528516 C9orf85Q96MD7 179 aa12.94□□□□□ -0.34
LTBP3-210ENST00000528516 BBC3Q96PG8 261 aaPredicted RBP12.94□□□□□ -0.34
LTBP3-210ENST00000528516 J3QKU1 62 aa12.93□□□□□ -0.34
LTBP3-210ENST00000528516 ZNF561-AS1K7EIQ3 104 aa12.93□□□□□ -0.34
LTBP3-210ENST00000528516 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
LTBP3-210ENST00000528516 COX7B2Q8TF08 81 aa12.93□□□□□ -0.34
LTBP3-210ENST00000528516 CRYBG3Q68DQ2 2970 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 Q6ZSN1 163 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 HRNRQ86YZ3 2850 aaPredicted RBP12.92□□□□□ -0.34
LTBP3-210ENST00000528516 KLK12Q9UKR0 248 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 PYGO1Q9Y3Y4 419 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 CRYGAP11844 174 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 UTP20O75691 2785 aaKnown RBP12.92□□□□□ -0.34
LTBP3-210ENST00000528516 C4orf26Q17RF5 130 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 FAM19A4Q96LR4 140 aa12.92□□□□□ -0.34
LTBP3-210ENST00000528516 NDUFA1O15239 70 aa12.91□□□□□ -0.34
LTBP3-210ENST00000528516 TMEM258P61165 79 aa12.91□□□□□ -0.34
LTBP3-210ENST00000528516 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
LTBP3-210ENST00000528516 SERP2Q8N6R1 65 aa12.91□□□□□ -0.34
LTBP3-210ENST00000528516 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
LTBP3-210ENST00000528516 NCR3O14931 201 aa12.9□□□□□ -0.34
LTBP3-210ENST00000528516 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
LTBP3-210ENST00000528516 TIMM17BO60830 172 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms