RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 LEPP41159 167 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 ASIPP42127 132 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
CTNND1-217ENST00000527599 NSUN5P1Q3KNT7 163 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 PSMG4Q5JS54 123 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 AMMECR1LQ6DCA0 310 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 C16orf95Q9H693 158 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 ST20Q9HBF5 79 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 HECTD1Q9ULT8 2610 aa3.66□□□□□ -1.82
CTNND1-217ENST00000527599 MAP1AP78559 2803 aaPredicted RBP3.66□□□□□ -1.82
CTNND1-217ENST00000527599 ACANP16112 2415 aa3.65□□□□□ -1.82
CTNND1-217ENST00000527599 MYO9AB2RTY4 2548 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 TINCRA0A1B0GVN0 87 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 C7orf71A4D174 169 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 H3BRM9 83 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 LEPROTL1O95214 131 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 IFI27P40305 119 aaPredicted RBP3.65□□□□□ -1.83
CTNND1-217ENST00000527599 NMUP48645 174 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 SPATA45Q537H7 98 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 SPANXN1Q5VSR9 72 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 LINC00336Q6ZUF6 198 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 LINC00173Q6ZV60 143 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 SPATA12Q7Z6I5 190 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 PMCHL2Q9BQD1 86 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 TMEM70Q9BUB7 260 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 SETXQ7Z333 2677 aaKnown RBP3.65□□□□□ -1.83
CTNND1-217ENST00000527599 WNK1Q9H4A3 2382 aa3.65□□□□□ -1.83
CTNND1-217ENST00000527599 MXRA5Q9NR99 2828 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 TRAV12-3A0A0B4J271 114 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 LOC389332A0A1B0GUA5 103 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 LINC01546A6NGU7 62 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 OR4C46A6NHA9 309 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 A8MTW9 85 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 SYS1-DBNDD2H3BUS1 97 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 CRXO43186 299 aaPredicted RBP3.64□□□□□ -1.83
CTNND1-217ENST00000527599 GNRH2O43555 120 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 SPINK8P0C7L1 97 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 CD28P10747 220 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 RNASE3P12724 160 aaKnown RBP3.64□□□□□ -1.83
CTNND1-217ENST00000527599 S100A4P26447 101 aaKnown RBP3.64□□□□□ -1.83
CTNND1-217ENST00000527599 AMTNQ6UX39 209 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 OR2K2Q8NGT1 345 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 AP1S3Q96PC3 154 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 HIST1H4GQ99525 98 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 TP53TG1Q9Y2A0 90 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 TIMM8BQ9Y5J9 83 aaPredicted RBP3.64□□□□□ -1.83
CTNND1-217ENST00000527599 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
CTNND1-217ENST00000527599 IGLV2-18A0A075B6J9 118 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 TRAV12-2A0A075B6T6 113 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 TMEM262E9PQX1 116 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 M0R381 172 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 HBDP02042 147 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 HINT1P49773 126 aaPredicted RBP3.63□□□□□ -1.83
CTNND1-217ENST00000527599 DEFB131AP59861 70 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 SPINK13Q1W4C9 94 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 DEFB114Q30KQ6 69 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 BVES-AS1Q5T3Y7 98 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 Q8N8P6 123 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 DYNLRB2Q8TF09 96 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 BAALCQ8WXS3 180 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 DPH3P1Q9H4G8 78 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 NXT2Q9NPJ8 142 aaKnown RBP3.63□□□□□ -1.83
CTNND1-217ENST00000527599 PHLDA3Q9Y5J5 127 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 ITPR2Q14571 2701 aa3.63□□□□□ -1.83
CTNND1-217ENST00000527599 FLNBO75369 2602 aaKnown RBP3.62□□□□□ -1.83
CTNND1-217ENST00000527599 TRAV26-2A0A0B4J265 109 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 RBMY1BA6NDE4 496 aaKnown RBP3.62□□□□□ -1.83
CTNND1-217ENST00000527599 RBMY1EA6NEQ0 496 aaKnown RBP3.62□□□□□ -1.83
CTNND1-217ENST00000527599 KNCNA6PVL3 124 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 C9JAW5 83 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 CD7P09564 240 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 RBMY1DP0C7P1 496 aaKnown RBP3.62□□□□□ -1.83
CTNND1-217ENST00000527599 RBMY1A1P0DJD3 496 aaKnown RBP3.62□□□□□ -1.83
CTNND1-217ENST00000527599 EMP1P54849 157 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 RBMY1FQ15415 496 aaKnown RBP3.62□□□□□ -1.83
CTNND1-217ENST00000527599 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 Q6ZUT4 128 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 ATOH7Q8N100 152 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 SMR3AQ99954 134 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 PRADC1Q9BSG0 188 aa3.62□□□□□ -1.83
CTNND1-217ENST00000527599 MTORP42345 2549 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 TRAV8-6A0A0B4J262 113 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 H3BMM0 161 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 MGPP08493 103 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 FCER1GP30273 86 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 FXYD7P58549 80 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 LGALS9BQ3B8N2 356 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 KPRPQ5T749 579 aaPredicted RBP3.61□□□□□ -1.83
CTNND1-217ENST00000527599 Q5W150 140 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 LGALS9CQ6DKI2 356 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 C1orf158Q8N1D5 194 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 RPL39LQ96EH5 51 aaKnown RBP3.61□□□□□ -1.83
CTNND1-217ENST00000527599 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
CTNND1-217ENST00000527599 ATP5G1P05496 136 aa3.6□□□□□ -1.83
CTNND1-217ENST00000527599 IFITM1P13164 125 aa3.6□□□□□ -1.83
CTNND1-217ENST00000527599 TAL2Q16559 108 aa3.6□□□□□ -1.83
CTNND1-217ENST00000527599 IFI27L1Q96BM0 104 aa3.6□□□□□ -1.83
CTNND1-217ENST00000527599 PLEKHB2Q96CS7 222 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms