RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 CT83Q5H943 113 aa9.41□□□□□ -0.9
CHMP4A-203ENST00000527154 TYMSOSQ8TAI1 123 aa9.41□□□□□ -0.9
CHMP4A-203ENST00000527154 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
CHMP4A-203ENST00000527154 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
CHMP4A-203ENST00000527154 NDUFA1O15239 70 aa9.4□□□□□ -0.9
CHMP4A-203ENST00000527154 CEBPGP53567 150 aa9.4□□□□□ -0.9
CHMP4A-203ENST00000527154 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-203ENST00000527154 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.9
CHMP4A-203ENST00000527154 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 NUPR1O60356 82 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 RAB4AP20338 218 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 FCER1GP30273 86 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
CHMP4A-203ENST00000527154 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
CHMP4A-203ENST00000527154 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
CHMP4A-203ENST00000527154 RNASE13Q5GAN3 156 aaKnown RBP9.38□□□□□ -0.91
CHMP4A-203ENST00000527154 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
CHMP4A-203ENST00000527154 VCYO14598 125 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 SMAGPQ0VAQ4 97 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 LINC00242Q5T6M2 205 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
CHMP4A-203ENST00000527154 SMKR1H3BMG3 65 aa9.36□□□□□ -0.91
CHMP4A-203ENST00000527154 KIAA0087Q14695 138 aa9.36□□□□□ -0.91
CHMP4A-203ENST00000527154 PEA15Q15121 130 aa9.36□□□□□ -0.91
CHMP4A-203ENST00000527154 Q6ZUT4 128 aa9.36□□□□□ -0.91
CHMP4A-203ENST00000527154 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
CHMP4A-203ENST00000527154 SRP19P09132 144 aaKnown RBP9.35□□□□□ -0.91
CHMP4A-203ENST00000527154 ASB16-AS1Q495Z4 193 aa9.35□□□□□ -0.91
CHMP4A-203ENST00000527154 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 NDUFC2-KCTD14E9PQ53 114 aa9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 PPP1R17O96001 155 aa9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 RAB14P61106 215 aa9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 LINC01551Q86U37 167 aa9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 KIR2DL4Q99706 377 aa9.34□□□□□ -0.91
CHMP4A-203ENST00000527154 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
CHMP4A-203ENST00000527154 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
CHMP4A-203ENST00000527154 LINC00173Q6ZV60 143 aa9.33□□□□□ -0.92
CHMP4A-203ENST00000527154 NRACQ8N912 160 aa9.33□□□□□ -0.92
CHMP4A-203ENST00000527154 CTDSP1Q9GZU7 261 aa9.33□□□□□ -0.92
CHMP4A-203ENST00000527154 RIGQ13278 110 aa9.32□□□□□ -0.92
CHMP4A-203ENST00000527154 LINC00304Q8N9R0 145 aa9.32□□□□□ -0.92
CHMP4A-203ENST00000527154 TMEM18Q96B42 140 aa9.32□□□□□ -0.92
CHMP4A-203ENST00000527154 OSTCQ9NRP0 149 aa9.32□□□□□ -0.92
CHMP4A-203ENST00000527154 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
CHMP4A-203ENST00000527154 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
CHMP4A-203ENST00000527154 RPL28P46779 137 aaKnown RBP9.3□□□□□ -0.92
CHMP4A-203ENST00000527154 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
CHMP4A-203ENST00000527154 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
CHMP4A-203ENST00000527154 C22orf24Q9Y442 160 aa9.3□□□□□ -0.92
CHMP4A-203ENST00000527154 BCE1O60756 84 aa9.29□□□□□ -0.92
CHMP4A-203ENST00000527154 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
CHMP4A-203ENST00000527154 ANAPC11Q9NYG5 84 aa9.29□□□□□ -0.92
CHMP4A-203ENST00000527154 NAT8Q9UHE5 227 aa9.29□□□□□ -0.92
CHMP4A-203ENST00000527154 V9GYV3 84 aa9.29□□□□□ -0.92
CHMP4A-203ENST00000527154 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-203ENST00000527154 TP73-AS1Q9UF72 201 aa9.28□□□□□ -0.92
CHMP4A-203ENST00000527154 FAM104BQ5XKR9 115 aa9.27□□□□□ -0.93
CHMP4A-203ENST00000527154 NAT8BQ9UHF3 227 aa9.27□□□□□ -0.93
CHMP4A-203ENST00000527154 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
CHMP4A-203ENST00000527154 MRPS36P82909 103 aaKnown RBP9.26□□□□□ -0.93
CHMP4A-203ENST00000527154 LBHQ53QV2 105 aaPredicted RBP9.26□□□□□ -0.93
CHMP4A-203ENST00000527154 CLLU1Q5K131 121 aa9.26□□□□□ -0.93
CHMP4A-203ENST00000527154 C20orf78Q9BR46 151 aa9.26□□□□□ -0.93
CHMP4A-203ENST00000527154 LINC00862A6NCI5 91 aa9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 C9JQL5 133 aa9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 TCAPO15273 167 aa9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 RPL23P62829 140 aaKnown RBP9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 ADIRFQ15847 76 aa9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 PACRGQ96M98 296 aaPredicted RBP9.25□□□□□ -0.93
CHMP4A-203ENST00000527154 TRBV24-1A0A075B6N3 115 aa9.24□□□□□ -0.93
CHMP4A-203ENST00000527154 CKS2P33552 79 aa9.24□□□□□ -0.93
CHMP4A-203ENST00000527154 RPL32P62910 135 aaKnown RBP9.24□□□□□ -0.93
CHMP4A-203ENST00000527154 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
CHMP4A-203ENST00000527154 SPANXA1Q9NS26 97 aa9.24□□□□□ -0.93
CHMP4A-203ENST00000527154 IFITM10A6NMD0 228 aa9.23□□□□□ -0.93
CHMP4A-203ENST00000527154 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
CHMP4A-203ENST00000527154 HBBP68871 147 aa9.23□□□□□ -0.93
CHMP4A-203ENST00000527154 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
CHMP4A-203ENST00000527154 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
CHMP4A-203ENST00000527154 PNRC1Q12796 327 aaPredicted RBP9.22□□□□□ -0.93
CHMP4A-203ENST00000527154 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
CHMP4A-203ENST00000527154 LINC01561Q8N1V8 128 aa9.22□□□□□ -0.93
CHMP4A-203ENST00000527154 SMIM2Q9BVW6 85 aa9.22□□□□□ -0.93
CHMP4A-203ENST00000527154 A0A1B0GW15 77 aa9.21□□□□□ -0.94
CHMP4A-203ENST00000527154 UQCC3Q6UW78 93 aa9.21□□□□□ -0.94
CHMP4A-203ENST00000527154 TGIF2-C20orf24A0A0A6YYL0 155 aa9.2□□□□□ -0.94
CHMP4A-203ENST00000527154 SMIM27A0A1W2PRY6 76 aa9.2□□□□□ -0.94
CHMP4A-203ENST00000527154 D6R8Y8 96 aa9.2□□□□□ -0.94
CHMP4A-203ENST00000527154 NPYP01303 97 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms