RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 LINC01549A6NIU2 74 aa9.27□□□□□ -0.93
NXF1-204ENST00000527064 SDIM1Q6ZPB5 146 aa9.27□□□□□ -0.93
NXF1-204ENST00000527064 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 C5orf38Q86SI9 138 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 CIRBP-AS1Q8TBR5 109 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 TOMM6Q96B49 74 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 VCX2Q9H322 139 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
NXF1-204ENST00000527064 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
NXF1-204ENST00000527064 OR10D4PQ8NGN7 298 aa9.25□□□□□ -0.93
NXF1-204ENST00000527064 CARD19Q96LW7 228 aa9.25□□□□□ -0.93
NXF1-204ENST00000527064 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
NXF1-204ENST00000527064 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
NXF1-204ENST00000527064 AMELXQ99217 191 aa9.24□□□□□ -0.93
NXF1-204ENST00000527064 IGLV4-69A0A075B6H9 119 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
NXF1-204ENST00000527064 UBE2D1P51668 147 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 LINC00242Q5T6M2 205 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 ERASQ7Z444 233 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
NXF1-204ENST00000527064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
NXF1-204ENST00000527064 PCLOQ9Y6V0 5065 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 COX6A2Q02221 97 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
NXF1-204ENST00000527064 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 SLC7A5P1Q8MH63 180 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 ORAOV1Q8WV07 137 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
NXF1-204ENST00000527064 A0A087WZ39 114 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 F8WDY8 70 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 SEC11AP67812 179 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 DPH3Q96FX2 82 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 YPEL4Q96NS1 127 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 LINC00474Q9P2X8 69 aa9.21□□□□□ -0.94
NXF1-204ENST00000527064 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
NXF1-204ENST00000527064 RAB5BP61020 215 aa9.2□□□□□ -0.94
NXF1-204ENST00000527064 CBLN2Q8IUK8 224 aa9.2□□□□□ -0.94
NXF1-204ENST00000527064 C18orf32Q8TCD1 76 aa9.2□□□□□ -0.94
NXF1-204ENST00000527064 PANO1I0J062 215 aa9.19□□□□□ -0.94
NXF1-204ENST00000527064 HERVK_113P63121 156 aa9.19□□□□□ -0.94
NXF1-204ENST00000527064 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
NXF1-204ENST00000527064 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
NXF1-204ENST00000527064 FAT1Q14517 4588 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 LINC00614P0C842 121 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 ZC2HC1BQ5TFG8 222 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 Q6ZRU5 148 aa9.18□□□□□ -0.94
NXF1-204ENST00000527064 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
NXF1-204ENST00000527064 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.17□□□□□ -0.94
NXF1-204ENST00000527064 NDUFA1O15239 70 aa9.17□□□□□ -0.94
NXF1-204ENST00000527064 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
NXF1-204ENST00000527064 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
NXF1-204ENST00000527064 GEMIN7Q9H840 131 aaKnown RBP9.17□□□□□ -0.94
NXF1-204ENST00000527064 A0A087WYN8 130 aa9.16□□□□□ -0.94
NXF1-204ENST00000527064 A0A096LNI7 61 aa9.16□□□□□ -0.94
NXF1-204ENST00000527064 HBDP02042 147 aa9.16□□□□□ -0.94
NXF1-204ENST00000527064 MRPL35Q9NZE8 188 aaKnown RBP9.16□□□□□ -0.94
NXF1-204ENST00000527064 PMVKQ15126 192 aa9.15□□□□□ -0.94
NXF1-204ENST00000527064 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.94
NXF1-204ENST00000527064 PLAC8Q9NZF1 115 aa9.15□□□□□ -0.94
NXF1-204ENST00000527064 VPS13BQ7Z7G8 4022 aa9.15□□□□□ -0.94
NXF1-204ENST00000527064 TINCRA0A1B0GVN0 87 aa9.14□□□□□ -0.95
NXF1-204ENST00000527064 PRSS2P07478 247 aa9.14□□□□□ -0.95
NXF1-204ENST00000527064 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
NXF1-204ENST00000527064 URB1-AS1Q96HZ7 61 aa9.14□□□□□ -0.95
NXF1-204ENST00000527064 CST9LQ9H4G1 147 aa9.14□□□□□ -0.95
NXF1-204ENST00000527064 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
NXF1-204ENST00000527064 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
NXF1-204ENST00000527064 RPL18AQ02543 176 aaKnown RBP9.13□□□□□ -0.95
NXF1-204ENST00000527064 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
NXF1-204ENST00000527064 LINC00469Q8N7U9 141 aa9.13□□□□□ -0.95
NXF1-204ENST00000527064 STPG4Q8N801 248 aa9.13□□□□□ -0.95
NXF1-204ENST00000527064 CHCHD1Q96BP2 118 aaKnown RBP9.13□□□□□ -0.95
NXF1-204ENST00000527064 CDKN2A-AS1Q9UH64 79 aa9.13□□□□□ -0.95
NXF1-204ENST00000527064 A0A096LNJ9 63 aa9.12□□□□□ -0.95
NXF1-204ENST00000527064 ATP5LO75964 103 aa9.12□□□□□ -0.95
NXF1-204ENST00000527064 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
NXF1-204ENST00000527064 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
NXF1-204ENST00000527064 TRBV30A0A0K0K1B3 111 aa9.11□□□□□ -0.95
NXF1-204ENST00000527064 PMCHL1Q16048 86 aa9.11□□□□□ -0.95
NXF1-204ENST00000527064 Q8IZM0 81 aa9.11□□□□□ -0.95
NXF1-204ENST00000527064 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
NXF1-204ENST00000527064 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
NXF1-204ENST00000527064 TRGC2P03986 189 aa9.1□□□□□ -0.95
NXF1-204ENST00000527064 CKS1BP61024 79 aa9.1□□□□□ -0.95
NXF1-204ENST00000527064 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
NXF1-204ENST00000527064 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
NXF1-204ENST00000527064 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
NXF1-204ENST00000527064 H3BRM9 83 aa9.09□□□□□ -0.95
NXF1-204ENST00000527064 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
NXF1-204ENST00000527064 NDUFA6P56556 154 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms