RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
CCS-204ENST00000526066 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
CCS-204ENST00000526066 Q9HAA7 133 aa11.49□□□□□ -0.57
CCS-204ENST00000526066 IFITM10A6NMD0 228 aa11.48□□□□□ -0.57
CCS-204ENST00000526066 PMVKQ15126 192 aa11.48□□□□□ -0.57
CCS-204ENST00000526066 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
CCS-204ENST00000526066 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
CCS-204ENST00000526066 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 C5orf52A6NGY3 159 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 FABP4P15090 132 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 SS18Q15532 418 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 C1orf43Q9BWL3 253 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 CST9LQ9H4G1 147 aa11.47□□□□□ -0.57
CCS-204ENST00000526066 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
CCS-204ENST00000526066 UBE2D1P51668 147 aa11.46□□□□□ -0.57
CCS-204ENST00000526066 SNRPEP62304 92 aaKnown RBP11.46□□□□□ -0.57
CCS-204ENST00000526066 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
CCS-204ENST00000526066 Q6ZRN7 208 aaPredicted RBP11.46□□□□□ -0.57
CCS-204ENST00000526066 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
CCS-204ENST00000526066 PRSS1P07477 247 aa11.45□□□□□ -0.58
CCS-204ENST00000526066 S100A2P29034 98 aa11.45□□□□□ -0.58
CCS-204ENST00000526066 KRTAP26-1Q6PEX3 210 aa11.45□□□□□ -0.58
CCS-204ENST00000526066 FAM19A3Q7Z5A8 133 aa11.45□□□□□ -0.58
CCS-204ENST00000526066 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
CCS-204ENST00000526066 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
CCS-204ENST00000526066 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
CCS-204ENST00000526066 FAM229AH3BQW9 127 aa11.44□□□□□ -0.58
CCS-204ENST00000526066 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCS-204ENST00000526066 XGP55808 180 aa11.43□□□□□ -0.58
CCS-204ENST00000526066 SEC11AP67812 179 aa11.43□□□□□ -0.58
CCS-204ENST00000526066 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
CCS-204ENST00000526066 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
CCS-204ENST00000526066 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
CCS-204ENST00000526066 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
CCS-204ENST00000526066 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
CCS-204ENST00000526066 A0A087WTM6 91 aa11.41□□□□□ -0.58
CCS-204ENST00000526066 XCL1P47992 114 aa11.41□□□□□ -0.58
CCS-204ENST00000526066 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.58
CCS-204ENST00000526066 FOXI1Q12951 378 aa11.4□□□□□ -0.58
CCS-204ENST00000526066 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 TINCRA0A1B0GVN0 87 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 PSCAO43653 123 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 IGLC3P0DOY3 106 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 GCSHP23434 173 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 KRTAP10-1P60331 282 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 HERVK_113P63121 156 aa11.39□□□□□ -0.59
CCS-204ENST00000526066 CHTOPQ9Y3Y2 248 aaKnown RBP11.39□□□□□ -0.59
CCS-204ENST00000526066 F8VRH5 84 aa11.38□□□□□ -0.59
CCS-204ENST00000526066 J3QL48 77 aa11.38□□□□□ -0.59
CCS-204ENST00000526066 SMR3BP02814 79 aaPredicted RBP11.38□□□□□ -0.59
CCS-204ENST00000526066 ODF1Q14990 250 aa11.38□□□□□ -0.59
CCS-204ENST00000526066 GEMIN7Q9H840 131 aaKnown RBP11.38□□□□□ -0.59
CCS-204ENST00000526066 IGLV4-69A0A075B6H9 119 aa11.37□□□□□ -0.59
CCS-204ENST00000526066 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
CCS-204ENST00000526066 C3orf79P0CE67 100 aa11.37□□□□□ -0.59
CCS-204ENST00000526066 COX6A2Q02221 97 aa11.37□□□□□ -0.59
CCS-204ENST00000526066 PET117Q6UWS5 81 aa11.37□□□□□ -0.59
CCS-204ENST00000526066 H0Y8G0 127 aa11.36□□□□□ -0.59
CCS-204ENST00000526066 COX7A2LO14548 114 aa11.36□□□□□ -0.59
CCS-204ENST00000526066 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
CCS-204ENST00000526066 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
CCS-204ENST00000526066 A0A087WZ39 114 aa11.35□□□□□ -0.59
CCS-204ENST00000526066 KRTDAPP60985 99 aa11.35□□□□□ -0.59
CCS-204ENST00000526066 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
CCS-204ENST00000526066 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
CCS-204ENST00000526066 IGLV5-52A0A0A0MRZ9 124 aa11.34□□□□□ -0.59
CCS-204ENST00000526066 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
CCS-204ENST00000526066 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
CCS-204ENST00000526066 C5orf38Q86SI9 138 aa11.34□□□□□ -0.59
CCS-204ENST00000526066 LRCOL1A6NCL2 159 aa11.33□□□□□ -0.6
CCS-204ENST00000526066 PLNP26678 52 aa11.33□□□□□ -0.6
CCS-204ENST00000526066 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
CCS-204ENST00000526066 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
CCS-204ENST00000526066 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
CCS-204ENST00000526066 DPM2O94777 84 aa11.32□□□□□ -0.6
CCS-204ENST00000526066 MALP21145 153 aa11.32□□□□□ -0.6
CCS-204ENST00000526066 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
CCS-204ENST00000526066 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
CCS-204ENST00000526066 C20orf202A1L168 122 aa11.31□□□□□ -0.6
CCS-204ENST00000526066 H3BRM9 83 aa11.31□□□□□ -0.6
CCS-204ENST00000526066 APOMO95445 188 aa11.31□□□□□ -0.6
CCS-204ENST00000526066 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
CCS-204ENST00000526066 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
CCS-204ENST00000526066 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
CCS-204ENST00000526066 HAMPP81172 84 aa11.3□□□□□ -0.6
CCS-204ENST00000526066 OR10D4PQ8NGN7 298 aa11.3□□□□□ -0.6
CCS-204ENST00000526066 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 IGKCP01834 107 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 AKR1D1P51857 326 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 WFDC2Q14508 124 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 C14orf177Q52M58 125 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
CCS-204ENST00000526066 GVQW2A0A096LPI5 108 aaPredicted RBP11.28□□□□□ -0.6
CCS-204ENST00000526066 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
CCS-204ENST00000526066 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
CCS-204ENST00000526066 LECT2O14960 151 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms