RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, human

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-213	ENST00000524516	MRPL52	Q86TS9	123 aa	Known RBP	4.19	□□□□□ -1.74
PUM1-213	ENST00000524516	FMC1	Q96HJ9	113 aa		4.19	□□□□□ -1.74
PUM1-213	ENST00000524516	TRGC1	P0CF51	173 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	STAG3L2	P0CL84	134 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	STAG3L3	P0CL85	134 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	PMCH	P20382	165 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	IL15RA	Q13261	267 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	CBLN2	Q8IUK8	224 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	ENKUR	Q8TC29	256 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	HIGD2A	Q9BW72	106 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	KRTAP2-2	Q9BYT5	123 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	KRTAP2-1	Q9BYU5	128 aa		4.18	□□□□□ -1.74
PUM1-213	ENST00000524516	SDHAF1	A6NFY7	115 aa		4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	INMT-MINDY4	F8WBC2	141 aa		4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	LTA	P01374	205 aa		4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	FOXA3	P55318	350 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	RPL32	P62910	135 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	HIST1H2BA	Q96A08	127 aa		4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	RPL39L	Q96EH5	51 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	TMA7	Q9Y2S6	64 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-213	ENST00000524516	IGKV2-28	A0A075B6P5	120 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516		A0A1W2PRE2	83 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	C7orf77	A4D0Y5	90 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516		I3L3M4	83 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	IGKV2D-28	P01615	120 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	IGLV6-57	P01721	117 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	TCTE3	Q8IZS6	198 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	GATD1	Q8NB37	220 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	RAB24	Q969Q5	203 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	SPRR4	Q96PI1	79 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	GNB1L	Q9BYB4	327 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	TMEM242	Q9NWH2	141 aa		4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-213	ENST00000524516	LOC105371267	A0A1B0GV96	52 aa		4.15	□□□□□ -1.75
PUM1-213	ENST00000524516		H0YIZ8	118 aa		4.15	□□□□□ -1.75
PUM1-213	ENST00000524516	CXorf1	O96002	111 aa		4.15	□□□□□ -1.75
PUM1-213	ENST00000524516	RPL37	P61927	97 aa	Known RBP	4.15	□□□□□ -1.75
PUM1-213	ENST00000524516	NKAPP1	Q8N9T2	125 aa		4.15	□□□□□ -1.75
PUM1-213	ENST00000524516	SMIM3	Q9BZL3	60 aa		4.15	□□□□□ -1.75
PUM1-213	ENST00000524516	C20orf202	A1L168	122 aa		4.14	□□□□□ -1.75
PUM1-213	ENST00000524516	KRTAP5-9	P26371	169 aa		4.14	□□□□□ -1.75
PUM1-213	ENST00000524516	SMAGP	Q0VAQ4	97 aa		4.14	□□□□□ -1.75
PUM1-213	ENST00000524516	MOBP	Q13875	183 aa		4.14	□□□□□ -1.75
PUM1-213	ENST00000524516	GPR98	Q8WXG9	6306 aa		4.14	□□□□□ -1.75
PUM1-213	ENST00000524516	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.13	□□□□□ -1.75
PUM1-213	ENST00000524516	SSNA1	O43805	119 aa		4.13	□□□□□ -1.75
PUM1-213	ENST00000524516	AKR1C3	P42330	323 aa		4.13	□□□□□ -1.75
PUM1-213	ENST00000524516	KIAA0087	Q14695	138 aa		4.13	□□□□□ -1.75
PUM1-213	ENST00000524516		Q6ZUT4	128 aa		4.13	□□□□□ -1.75
PUM1-213	ENST00000524516	SLC51B	Q86UW2	128 aa		4.13	□□□□□ -1.75
PUM1-213	ENST00000524516	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	IGLV9-49	A0A0B4J1Y8	123 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	LINC00862	A6NCI5	91 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	H2BFS	P57053	126 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516		Q5BKY6	102 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	PPP1R1C	Q8WVI7	109 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	NKX6-2	Q9C056	277 aa	Predicted RBP	4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	TMEM126A	Q9H061	195 aa		4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	GEMIN7	Q9H840	131 aa	Known RBP	4.12	□□□□□ -1.75
PUM1-213	ENST00000524516	RAB19	A4D1S5	217 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	TMEM238	C9JI98	176 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	MPC2	O95563	127 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	CKS1B	P61024	79 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	LINC01551	Q86U37	167 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	STOML3	Q8TAV4	291 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	RNASE7	Q9H1E1	156 aa	Known RBP	4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	CSDC2	Q9Y534	153 aa	Known RBP	4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	HSPB11	Q9Y547	144 aa		4.11	□□□□□ -1.75
PUM1-213	ENST00000524516	PRSS2	P07478	247 aa		4.1	□□□□□ -1.75
PUM1-213	ENST00000524516	IGLC6	P0CF74	106 aa		4.1	□□□□□ -1.75
PUM1-213	ENST00000524516	RAB14	P61106	215 aa		4.1	□□□□□ -1.75
PUM1-213	ENST00000524516	C9orf62	Q8N4C0	152 aa		4.1	□□□□□ -1.75
PUM1-213	ENST00000524516	MDN1	Q9NU22	5596 aa		4.1	□□□□□ -1.75
PUM1-213	ENST00000524516	FAM74A7	A6NL05	159 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516		F2Z2F3	143 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	SCO1	O75880	301 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	FCER1G	P30273	86 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	FHIT	P49789	147 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	CLLU1	Q5K131	121 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	TEX261	Q6UWH6	196 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	ST20	Q9HBF5	79 aa		4.09	□□□□□ -1.75
PUM1-213	ENST00000524516	IFNA1	P01562	189 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	NPS	P0C0P6	89 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	TWIST1	Q15672	202 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	SSBP3-AS1	Q7Z2R9	100 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	COMMD7	Q86VX2	200 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	BAGE2	Q86Y30	109 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	C20orf166-AS1	Q96NR2	134 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	TIMM17A	Q99595	171 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	TOMM7	Q9P0U1	55 aa		4.08	□□□□□ -1.76
PUM1-213	ENST00000524516	IFITM10	A6NMD0	228 aa		4.07	□□□□□ -1.76
PUM1-213	ENST00000524516	SMLR1	H3BR10	107 aa		4.07	□□□□□ -1.76
PUM1-213	ENST00000524516	PET100	P0DJ07	73 aa		4.07	□□□□□ -1.76
PUM1-213	ENST00000524516	FAM231D	Q6ZW35	169 aa		4.07	□□□□□ -1.76
PUM1-213	ENST00000524516	SMIM15	Q7Z3B0	74 aa		4.07	□□□□□ -1.76
PUM1-213	ENST00000524516	IGLV5-37	A0A075B6J1	123 aa		4.06	□□□□□ -1.76
PUM1-213	ENST00000524516	XKRY2	A2RUG3	117 aa		4.06	□□□□□ -1.76
PUM1-213	ENST00000524516		M0R378	163 aa		4.06	□□□□□ -1.76
PUM1-213	ENST00000524516	MB	P02144	154 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms