RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
PACSIN3-202ENST00000524509 LECT2O14960 151 aa11.56□□□□□ -0.56
PACSIN3-202ENST00000524509 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
PACSIN3-202ENST00000524509 URB1-AS1Q96HZ7 61 aa11.56□□□□□ -0.56
PACSIN3-202ENST00000524509 UBE2D1P51668 147 aa11.54□□□□□ -0.56
PACSIN3-202ENST00000524509 PMVKQ15126 192 aa11.54□□□□□ -0.56
PACSIN3-202ENST00000524509 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
PACSIN3-202ENST00000524509 hDV102S1A0JD36 115 aa11.53□□□□□ -0.56
PACSIN3-202ENST00000524509 HERVK_113P63121 156 aa11.53□□□□□ -0.56
PACSIN3-202ENST00000524509 PDZD11Q5EBL8 140 aa11.53□□□□□ -0.56
PACSIN3-202ENST00000524509 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
PACSIN3-202ENST00000524509 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
PACSIN3-202ENST00000524509 KRTAP10-2P60368 255 aa11.52□□□□□ -0.57
PACSIN3-202ENST00000524509 WFDC2Q14508 124 aa11.52□□□□□ -0.57
PACSIN3-202ENST00000524509 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.57
PACSIN3-202ENST00000524509 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 GCSHP23434 173 aa11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 LINC00242Q5T6M2 205 aa11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
PACSIN3-202ENST00000524509 A0A096LNJ9 63 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 F8WDY8 70 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BKO60814 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 SERF1AO75920 110 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BJP06899 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 PRSS1P07477 247 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BOP23527 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BBP33778 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BDP58876 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BCP62807 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST2H2BEQ16778 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 OR10D4PQ8NGN7 298 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BHQ93079 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BNQ99877 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HIST1H2BMQ99879 126 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 HSPB8Q9UJY1 196 aa11.5□□□□□ -0.57
PACSIN3-202ENST00000524509 A0A087WZ39 114 aa11.49□□□□□ -0.57
PACSIN3-202ENST00000524509 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
PACSIN3-202ENST00000524509 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
PACSIN3-202ENST00000524509 C15orf56Q8N910 161 aa11.49□□□□□ -0.57
PACSIN3-202ENST00000524509 TINCRA0A1B0GVN0 87 aa11.48□□□□□ -0.57
PACSIN3-202ENST00000524509 NDUFA6P56556 154 aa11.48□□□□□ -0.57
PACSIN3-202ENST00000524509 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
PACSIN3-202ENST00000524509 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
PACSIN3-202ENST00000524509 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.57
PACSIN3-202ENST00000524509 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
PACSIN3-202ENST00000524509 TRAV12-1A0A0B4J245 112 aa11.45□□□□□ -0.58
PACSIN3-202ENST00000524509 H3BRM9 83 aa11.45□□□□□ -0.58
PACSIN3-202ENST00000524509 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
PACSIN3-202ENST00000524509 ZC2HC1BQ5TFG8 222 aa11.45□□□□□ -0.58
PACSIN3-202ENST00000524509 FAM19A2Q8N3H0 131 aa11.45□□□□□ -0.58
PACSIN3-202ENST00000524509 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
PACSIN3-202ENST00000524509 A0A0J9YXV3 536 aa11.44□□□□□ -0.58
PACSIN3-202ENST00000524509 HIGD2BQ4VC39 106 aa11.44□□□□□ -0.58
PACSIN3-202ENST00000524509 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
PACSIN3-202ENST00000524509 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
PACSIN3-202ENST00000524509 COX6A2Q02221 97 aa11.43□□□□□ -0.58
PACSIN3-202ENST00000524509 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
PACSIN3-202ENST00000524509 PRSS2P07478 247 aa11.42□□□□□ -0.58
PACSIN3-202ENST00000524509 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
PACSIN3-202ENST00000524509 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
PACSIN3-202ENST00000524509 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 LINC00310P59036 64 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 SYCNQ0VAF6 134 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 CAMK2N2Q96S95 79 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 FAT1Q14517 4588 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
PACSIN3-202ENST00000524509 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
PACSIN3-202ENST00000524509 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
PACSIN3-202ENST00000524509 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
PACSIN3-202ENST00000524509 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.58
PACSIN3-202ENST00000524509 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
PACSIN3-202ENST00000524509 F8VRH5 84 aa11.38□□□□□ -0.59
PACSIN3-202ENST00000524509 NDUFA1O15239 70 aa11.38□□□□□ -0.59
PACSIN3-202ENST00000524509 CXCL5P42830 114 aa11.38□□□□□ -0.59
PACSIN3-202ENST00000524509 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
PACSIN3-202ENST00000524509 C6orf226Q5I0X4 101 aa11.38□□□□□ -0.59
PACSIN3-202ENST00000524509 Q8IZM0 81 aa11.38□□□□□ -0.59
PACSIN3-202ENST00000524509 NUPR1O60356 82 aa11.37□□□□□ -0.59
PACSIN3-202ENST00000524509 FABP4P15090 132 aa11.37□□□□□ -0.59
PACSIN3-202ENST00000524509 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
PACSIN3-202ENST00000524509 KRTAP10-1P60331 282 aa11.37□□□□□ -0.59
PACSIN3-202ENST00000524509 SLPIP03973 132 aa11.36□□□□□ -0.59
PACSIN3-202ENST00000524509 S100A6P06703 90 aa11.36□□□□□ -0.59
PACSIN3-202ENST00000524509 CKS1BP61024 79 aa11.36□□□□□ -0.59
PACSIN3-202ENST00000524509 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
PACSIN3-202ENST00000524509 LINC00474Q9P2X8 69 aa11.36□□□□□ -0.59
PACSIN3-202ENST00000524509 PLNP26678 52 aa11.35□□□□□ -0.59
PACSIN3-202ENST00000524509 Q5VSD8 79 aa11.35□□□□□ -0.59
PACSIN3-202ENST00000524509 SRRM2Q9UQ35 2752 aaKnown RBP11.35□□□□□ -0.59
PACSIN3-202ENST00000524509 XGP55808 180 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms