RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NTM-AS1Q6ZSK4 140 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 OR5A1Q8NGJ0 315 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 C11orf45Q8TAV5 145 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 PHLDA1Q8WV24 401 aaPredicted RBP4.93□□□□□ -1.62
VPS11-201ENST00000524454 CDC42SE2Q9NRR3 84 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 SPANXB1Q9NS25 103 aaPredicted RBP4.93□□□□□ -1.62
VPS11-201ENST00000524454 TP73-AS1Q9UF72 201 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.92□□□□□ -1.62
VPS11-201ENST00000524454 IGKV2-29A2NJV5 120 aaPredicted RBP4.92□□□□□ -1.62
VPS11-201ENST00000524454 GAGE12JA6NER3 117 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 J3QQQ9 107 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 DEFB130BP0DP73 79 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 DEFB130AP0DP74 79 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 GAGE1Q13065 139 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 GAGE4Q13068 117 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 GAGE5Q13069 117 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 GAGE13Q4V321 117 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 CEMP1Q6PRD7 247 aaPredicted RBP4.92□□□□□ -1.62
VPS11-201ENST00000524454 SFTA2Q6UW10 78 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 Q6ZUT4 128 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 Q6ZVH6 145 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 ATP6V0E2Q8NHE4 81 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 PPDPFQ9H3Y8 114 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 Q9UF83 564 aa4.92□□□□□ -1.62
VPS11-201ENST00000524454 TRAV8-6A0A0B4J262 113 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 IGHV3-38A0A0C4DH36 116 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 IGHV1-58A0A0C4DH39 117 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 IGLV5-39A0A0G2JS06 123 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 A0A0J9YXV3 536 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 NUPR2A6NF83 97 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 LY6G6CO95867 125 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 LGALS3P17931 250 aaKnown RBP4.91□□□□□ -1.62
VPS11-201ENST00000524454 HINT1P49773 126 aaPredicted RBP4.91□□□□□ -1.62
VPS11-201ENST00000524454 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 AMMECR1LQ6DCA0 310 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 Q6ZTC4 211 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 LINC01561Q8N1V8 128 aa4.91□□□□□ -1.62
VPS11-201ENST00000524454 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
VPS11-201ENST00000524454 A0A1B0GWB2 263 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 TIMM17BO60830 172 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 GYPEP15421 78 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 GCSHP23434 173 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 BATFQ16520 125 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 MRPL23Q16540 153 aaKnown RBP4.9□□□□□ -1.63
VPS11-201ENST00000524454 CEND1Q8N111 149 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 LINC00476Q8WZB0 136 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 VSIG2Q96IQ7 327 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 OPRPNQ99935 248 aaPredicted RBP4.9□□□□□ -1.63
VPS11-201ENST00000524454 COX11Q9Y6N1 276 aa4.9□□□□□ -1.63
VPS11-201ENST00000524454 A0A0J9YXY3 114 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 IGLL5B9A064 214 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 TMEM238C9JI98 176 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 IGHV3-30-3P0DP02 117 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 C12orf74Q32Q52 190 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 LINC00242Q5T6M2 205 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 SCGB1D4Q6XE38 83 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 LINC00469Q8N7U9 141 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 MAPKAPK5-AS1Q8N8E1 139 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 COPS9Q8WXC6 57 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 KLK5Q9Y337 293 aaPredicted RBP4.89□□□□□ -1.63
VPS11-201ENST00000524454 ICOSQ9Y6W8 199 aa4.89□□□□□ -1.63
VPS11-201ENST00000524454 DNAH1Q9P2D7 4330 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 A0A0J9YY99 117 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 A0A1B0GV90 55 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 HTN3P15516 51 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 HERV-K104P63124 156 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 LELP1Q5T871 98 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 HIST1H4GQ99525 98 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 CHCHD5Q9BSY4 110 aa4.88□□□□□ -1.63
VPS11-201ENST00000524454 DEFB131BA0A096LNP1 70 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 LOC100131303A0A0U1RQF7 123 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 NDUFA1O15239 70 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 IFITM1P13164 125 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 PTTG1IPP53801 180 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 SPANXCQ9NY87 97 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 CDKN2A-AS1Q9UH64 79 aa4.87□□□□□ -1.63
VPS11-201ENST00000524454 A0A087WZ39 114 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 TRAV10A0A0B4J240 114 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 C9orf118A6NHY6 69 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 SMIM1B2RUZ4 78 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 F5H768 121 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 DEFB104AQ8WTQ1 72 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 NDUFA12Q9UI09 145 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 APLNQ9ULZ1 77 aa4.86□□□□□ -1.63
VPS11-201ENST00000524454 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.85□□□□□ -1.63
VPS11-201ENST00000524454 IGHV3OR16-9A0A0B4J2B5 98 aa4.85□□□□□ -1.63
VPS11-201ENST00000524454 IGHV3-30P01768 117 aa4.85□□□□□ -1.63
VPS11-201ENST00000524454 IGHV3-30-5P0DP03 117 aa4.85□□□□□ -1.63
VPS11-201ENST00000524454 FXYD2P54710 66 aa4.85□□□□□ -1.63
VPS11-201ENST00000524454 RBX1P62877 108 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms