RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 NDUFA5Q16718 116 aa13.33□□□□□ -0.28
TRAPPC9-215ENST00000524162 SPACA4Q8TDM5 124 aa13.33□□□□□ -0.28
TRAPPC9-215ENST00000524162 C2orf48Q96LS8 159 aa13.33□□□□□ -0.28
TRAPPC9-215ENST00000524162 OPRPNQ99935 248 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-215ENST00000524162 F8WDY8 70 aa13.32□□□□□ -0.28
TRAPPC9-215ENST00000524162 PANO1I0J062 215 aa13.32□□□□□ -0.28
TRAPPC9-215ENST00000524162 SVBPQ8N300 66 aa13.32□□□□□ -0.28
TRAPPC9-215ENST00000524162 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
TRAPPC9-215ENST00000524162 CARD19Q96LW7 228 aa13.32□□□□□ -0.28
TRAPPC9-215ENST00000524162 MYCBP2O75592 4640 aa13.32□□□□□ -0.28
TRAPPC9-215ENST00000524162 LINC01546A6NGU7 62 aa13.31□□□□□ -0.28
TRAPPC9-215ENST00000524162 SNAPINO95295 136 aa13.31□□□□□ -0.28
TRAPPC9-215ENST00000524162 COX6A2Q02221 97 aa13.31□□□□□ -0.28
TRAPPC9-215ENST00000524162 SYCNQ0VAF6 134 aa13.31□□□□□ -0.28
TRAPPC9-215ENST00000524162 ALKBH7Q9BT30 221 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-215ENST00000524162 LINC00474Q9P2X8 69 aa13.31□□□□□ -0.28
TRAPPC9-215ENST00000524162 IGIPA6NJ69 53 aa13.3□□□□□ -0.28
TRAPPC9-215ENST00000524162 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
TRAPPC9-215ENST00000524162 PAPPA-AS1Q5QFB9 102 aa13.3□□□□□ -0.28
TRAPPC9-215ENST00000524162 TEX43Q6ZNM6 134 aa13.3□□□□□ -0.28
TRAPPC9-215ENST00000524162 AMELXQ99217 191 aa13.3□□□□□ -0.28
TRAPPC9-215ENST00000524162 APOC3P02656 99 aa13.29□□□□□ -0.28
TRAPPC9-215ENST00000524162 KRTAP10-4P60372 401 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-215ENST00000524162 Q6ZN92 141 aa13.29□□□□□ -0.28
TRAPPC9-215ENST00000524162 C5orf38Q86SI9 138 aa13.29□□□□□ -0.28
TRAPPC9-215ENST00000524162 PLAC8Q9NZF1 115 aa13.29□□□□□ -0.28
TRAPPC9-215ENST00000524162 IGLV4-69A0A075B6H9 119 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 FAM19A3Q7Z5A8 133 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 LINC01561Q8N1V8 128 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 PRSS3P2Q8NHM4 247 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 C2orf88Q9BSF0 95 aa13.28□□□□□ -0.28
TRAPPC9-215ENST00000524162 A0A087WYN8 130 aa13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 A0A087WZ39 114 aa13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 RNF151Q2KHN1 245 aa13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 MRPL18Q9H0U6 180 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 VCX2Q9H322 139 aa13.27□□□□□ -0.29
TRAPPC9-215ENST00000524162 UBE2D1P51668 147 aa13.26□□□□□ -0.29
TRAPPC9-215ENST00000524162 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
TRAPPC9-215ENST00000524162 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
TRAPPC9-215ENST00000524162 LINC00173Q6ZV60 143 aa13.25□□□□□ -0.29
TRAPPC9-215ENST00000524162 SPAG11BQ08648 103 aa13.24□□□□□ -0.29
TRAPPC9-215ENST00000524162 FABP9Q0Z7S8 132 aa13.24□□□□□ -0.29
TRAPPC9-215ENST00000524162 ERASQ7Z444 233 aa13.24□□□□□ -0.29
TRAPPC9-215ENST00000524162 DPH3Q96FX2 82 aa13.24□□□□□ -0.29
TRAPPC9-215ENST00000524162 CAMK2N2Q96S95 79 aa13.24□□□□□ -0.29
TRAPPC9-215ENST00000524162 SEC11AP67812 179 aa13.23□□□□□ -0.29
TRAPPC9-215ENST00000524162 A0A096LNI7 61 aa13.22□□□□□ -0.29
TRAPPC9-215ENST00000524162 LOC107984640A0A0U1RRK4 108 aa13.22□□□□□ -0.29
TRAPPC9-215ENST00000524162 Q6ZRU5 148 aa13.22□□□□□ -0.29
TRAPPC9-215ENST00000524162 ORAOV1Q8WV07 137 aa13.22□□□□□ -0.29
TRAPPC9-215ENST00000524162 MRPL35Q9NZE8 188 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-215ENST00000524162 RPL37AP61513 92 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-215ENST00000524162 MAJINQ3KP22 176 aa13.2□□□□□ -0.3
TRAPPC9-215ENST00000524162 TRAPPC1Q9Y5R8 145 aa13.2□□□□□ -0.3
TRAPPC9-215ENST00000524162 PKHD1L1Q86WI1 4243 aa13.2□□□□□ -0.3
TRAPPC9-215ENST00000524162 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
TRAPPC9-215ENST00000524162 NDUFA1O15239 70 aa13.19□□□□□ -0.3
TRAPPC9-215ENST00000524162 PTTG1IPP53801 180 aa13.19□□□□□ -0.3
TRAPPC9-215ENST00000524162 HERVK_113P63121 156 aa13.18□□□□□ -0.3
TRAPPC9-215ENST00000524162 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
TRAPPC9-215ENST00000524162 STPG4Q8N801 248 aa13.18□□□□□ -0.3
TRAPPC9-215ENST00000524162 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
TRAPPC9-215ENST00000524162 KIAA0087Q14695 138 aa13.17□□□□□ -0.3
TRAPPC9-215ENST00000524162 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
TRAPPC9-215ENST00000524162 SMCO4Q9NRQ5 59 aa13.17□□□□□ -0.3
TRAPPC9-215ENST00000524162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-215ENST00000524162 TLX1NBP0CAT3 122 aa13.16□□□□□ -0.3
TRAPPC9-215ENST00000524162 C7orf33Q8WU49 177 aa13.16□□□□□ -0.3
TRAPPC9-215ENST00000524162 ZC2HC1BQ5TFG8 222 aa13.15□□□□□ -0.3
TRAPPC9-215ENST00000524162 C18orf32Q8TCD1 76 aa13.15□□□□□ -0.3
TRAPPC9-215ENST00000524162 KRTAP29-1A8MX34 341 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-215ENST00000524162 TRBV30A0A0K0K1B3 111 aa13.13□□□□□ -0.31
TRAPPC9-215ENST00000524162 LINC00614P0C842 121 aa13.12□□□□□ -0.31
TRAPPC9-215ENST00000524162 RAB5BP61020 215 aa13.12□□□□□ -0.31
TRAPPC9-215ENST00000524162 GEMIN7Q9H840 131 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-215ENST00000524162 HERC1Q15751 4861 aa13.11□□□□□ -0.31
TRAPPC9-215ENST00000524162 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
TRAPPC9-215ENST00000524162 TINCRA0A1B0GVN0 87 aa13.11□□□□□ -0.31
TRAPPC9-215ENST00000524162 Q8IZM0 81 aa13.11□□□□□ -0.31
TRAPPC9-215ENST00000524162 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
TRAPPC9-215ENST00000524162 PMVKQ15126 192 aa13.1□□□□□ -0.31
TRAPPC9-215ENST00000524162 UNQ6190/PRO20217Q6UXQ8 127 aa13.1□□□□□ -0.31
TRAPPC9-215ENST00000524162 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
TRAPPC9-215ENST00000524162 C6orf48Q9UBA6 75 aa13.1□□□□□ -0.31
TRAPPC9-215ENST00000524162 CDKN2A-AS1Q9UH64 79 aa13.1□□□□□ -0.31
TRAPPC9-215ENST00000524162 OXTP01178 125 aa13.09□□□□□ -0.31
TRAPPC9-215ENST00000524162 C10orf25Q5T742 122 aa13.09□□□□□ -0.31
TRAPPC9-215ENST00000524162 URB1-AS1Q96HZ7 61 aa13.09□□□□□ -0.31
TRAPPC9-215ENST00000524162 A0A096LNJ9 63 aa13.08□□□□□ -0.32
TRAPPC9-215ENST00000524162 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
TRAPPC9-215ENST00000524162 HBDP02042 147 aa13.07□□□□□ -0.32
TRAPPC9-215ENST00000524162 PRSS2P07478 247 aa13.07□□□□□ -0.32
TRAPPC9-215ENST00000524162 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-215ENST00000524162 PACRGQ96M98 296 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-215ENST00000524162 LRP1Q07954 4544 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-215ENST00000524162 CXCL5P42830 114 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms