RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 SNURFQ9Y675 71 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 A0A087WVE0 104 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 CTXND1A0A1B0GTU2 59 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 LYPD6Q86Y78 171 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 PRR15LQ9BU68 103 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 ORMDL1Q9P0S3 153 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 TTC28Q96AY4 2481 aa3.56□□□□□ -1.84
EFCAB13-213ENST00000523978 TRAV12-1A0A0B4J245 112 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 A0A0J9YY99 117 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 A0A1W2PPR1 153 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 WISP3O95389 354 aaPredicted RBP3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 IGLV1-47P01700 117 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 IGHV3-30P01768 117 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 IGHV3-30-5P0DP03 117 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 KPRPQ5T749 579 aaPredicted RBP3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 Q9BRP9 147 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 COL4A1P02462 1669 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 LRRC37A3O60309 1634 aa3.55□□□□□ -1.84
EFCAB13-213ENST00000523978 PCDH15Q96QU1 1955 aa3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 TRBV6-5A0A0K0K1A5 114 aa3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
EFCAB13-213ENST00000523978 NCOA6Q14686 2063 aaPredicted RBP3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 UNC80Q8N2C7 3258 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 IGLV2-18A0A075B6J9 118 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 CLPSL1A2RUU4 121 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 PLNP26678 52 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 Q8NAQ8 132 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 RNF5Q99942 180 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 MALRD1Q5VYJ5 2156 aa3.53□□□□□ -1.84
EFCAB13-213ENST00000523978 LMO7Q8WWI1 1683 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 ATRXP46100 2492 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 A0A1B0GU33 70 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 UBALD1Q8TB05 177 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 TMEM263Q8WUH6 116 aaKnown RBP3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 LHFPL6Q9Y693 200 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 MINOS1-NBL1R4GNA1 71 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 MUC6Q6W4X9 2439 aa3.52□□□□□ -1.85
EFCAB13-213ENST00000523978 A0A1B0GUT8 65 aa3.51□□□□□ -1.85
EFCAB13-213ENST00000523978 SPAG11BQ08648 103 aa3.51□□□□□ -1.85
EFCAB13-213ENST00000523978 SPAG11AQ6PDA7 123 aa3.51□□□□□ -1.85
EFCAB13-213ENST00000523978 WFDC6Q9BQY6 131 aa3.51□□□□□ -1.85
EFCAB13-213ENST00000523978 PRR34Q9NV39 138 aa3.51□□□□□ -1.85
EFCAB13-213ENST00000523978 A0A0G2JMZ2 1700 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 LRRC37A2A6NM11 1700 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 LRRC37AA6NMS7 1700 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 A0A1W2PNU3 283 aaPredicted RBP3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 NUPR2A6NF83 97 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 NDUFB1O75438 58 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 PPP1R17O96001 155 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 ERHP84090 104 aaKnown RBP3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 KIAA0100Q14667 2235 aaKnown RBP3.5□□□□□ -1.85
EFCAB13-213ENST00000523978 ZNF831Q5JPB2 1677 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 SPTBP11277 2137 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 MYO7BQ6PIF6 2116 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 HEATR5BQ9P2D3 2071 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 NREPQ16612 68 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 Q5W150 140 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 OBSCN-AS1Q96MR7 158 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 ZDBF2Q9HCK1 2354 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 VCANP13611 3396 aa3.49□□□□□ -1.85
EFCAB13-213ENST00000523978 DIDO1Q9BTC0 2240 aaKnown RBP3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 NRXN2Q9P2S2 1712 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 LINC01546A6NGU7 62 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 CISD3P0C7P0 127 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 LYPD1Q8N2G4 141 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 PLAC8Q9NZF1 115 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 MRPL36Q9P0J6 103 aaKnown RBP3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 LINC01558Q9Y6Z2 57 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 CABIN1Q9Y6J0 2220 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 SDK2Q58EX2 2172 aa3.48□□□□□ -1.85
EFCAB13-213ENST00000523978 FREM3P0C091 2139 aa3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 TNRC6BQ9UPQ9 1833 aaKnown RBP3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 K7EMI3 77 aa3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 IGKV1-17P01599 117 aa3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 CNBPP62633 177 aaKnown RBP3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 LINC00846Q9NV44 126 aa3.47□□□□□ -1.85
EFCAB13-213ENST00000523978 ZNF318Q5VUA4 2279 aa3.46□□□□□ -1.85
EFCAB13-213ENST00000523978 A0A096LNJ9 63 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 LCE6AA0A183 80 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 J3QRE1 110 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 FDCSPQ8NFU4 85 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 UBL5Q9BZL1 73 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 KLK12Q9UKR0 248 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 ZGRF1Q86YA3 2104 aa3.46□□□□□ -1.86
EFCAB13-213ENST00000523978 TRANK1O15050 2925 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms