RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
VEGFA-224ENST00000523873 HERC2O95714 4834 aa8.31□□□□□ -1.08
VEGFA-224ENST00000523873 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
VEGFA-224ENST00000523873 ERASQ7Z444 233 aa8.3□□□□□ -1.08
VEGFA-224ENST00000523873 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
VEGFA-224ENST00000523873 KRTAP17-1Q9BYP8 105 aa8.3□□□□□ -1.08
VEGFA-224ENST00000523873 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
VEGFA-224ENST00000523873 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
VEGFA-224ENST00000523873 HBDP02042 147 aa8.29□□□□□ -1.08
VEGFA-224ENST00000523873 NPSP0C0P6 89 aa8.29□□□□□ -1.08
VEGFA-224ENST00000523873 XGP55808 180 aa8.29□□□□□ -1.08
VEGFA-224ENST00000523873 RAB5BP61020 215 aa8.29□□□□□ -1.08
VEGFA-224ENST00000523873 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
VEGFA-224ENST00000523873 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
VEGFA-224ENST00000523873 BAGE3Q86Y29 109 aa8.28□□□□□ -1.08
VEGFA-224ENST00000523873 C9orf163Q8N9P6 203 aa8.28□□□□□ -1.08
VEGFA-224ENST00000523873 HSPG2P98160 4391 aa8.27□□□□□ -1.08
VEGFA-224ENST00000523873 A0A0J9YXV3 536 aa8.27□□□□□ -1.09
VEGFA-224ENST00000523873 LINC00310P59036 64 aa8.27□□□□□ -1.09
VEGFA-224ENST00000523873 PDZD11Q5EBL8 140 aa8.27□□□□□ -1.09
VEGFA-224ENST00000523873 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
VEGFA-224ENST00000523873 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
VEGFA-224ENST00000523873 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
VEGFA-224ENST00000523873 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
VEGFA-224ENST00000523873 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
VEGFA-224ENST00000523873 CHCHD1Q96BP2 118 aaKnown RBP8.26□□□□□ -1.09
VEGFA-224ENST00000523873 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.25□□□□□ -1.09
VEGFA-224ENST00000523873 NUPR1O60356 82 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 APOMO95445 188 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 NDUFA6P56556 154 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 SPAG11BQ08648 103 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 PMVKQ15126 192 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 Q6ZSA8 131 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 CST9LQ9H4G1 147 aa8.25□□□□□ -1.09
VEGFA-224ENST00000523873 A0A087WZ39 114 aa8.24□□□□□ -1.09
VEGFA-224ENST00000523873 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-224ENST00000523873 PANO1I0J062 215 aa8.24□□□□□ -1.09
VEGFA-224ENST00000523873 HSBP1O75506 76 aa8.24□□□□□ -1.09
VEGFA-224ENST00000523873 SERF1AO75920 110 aa8.24□□□□□ -1.09
VEGFA-224ENST00000523873 SDIM1Q6ZPB5 146 aa8.24□□□□□ -1.09
VEGFA-224ENST00000523873 CARD19Q96LW7 228 aa8.24□□□□□ -1.09
VEGFA-224ENST00000523873 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
VEGFA-224ENST00000523873 S100A1P23297 94 aa8.23□□□□□ -1.09
VEGFA-224ENST00000523873 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
VEGFA-224ENST00000523873 Q6ZRU5 148 aa8.23□□□□□ -1.09
VEGFA-224ENST00000523873 GEMIN7Q9H840 131 aaKnown RBP8.23□□□□□ -1.09
VEGFA-224ENST00000523873 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
VEGFA-224ENST00000523873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-224ENST00000523873 ATP5LO75964 103 aa8.22□□□□□ -1.09
VEGFA-224ENST00000523873 SMR3BP02814 79 aaPredicted RBP8.22□□□□□ -1.09
VEGFA-224ENST00000523873 HERVK_113P63121 156 aa8.22□□□□□ -1.09
VEGFA-224ENST00000523873 SCXQ7RTU7 201 aa8.22□□□□□ -1.09
VEGFA-224ENST00000523873 OR10D4PQ8NGN7 298 aa8.22□□□□□ -1.09
VEGFA-224ENST00000523873 CAMK2N2Q96S95 79 aa8.22□□□□□ -1.09
VEGFA-224ENST00000523873 TINCRA0A1B0GVN0 87 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BKO60814 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BJP06899 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BOP23527 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BBP33778 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BDP58876 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BCP62807 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST2H2BEQ16778 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.21□□□□□ -1.1
VEGFA-224ENST00000523873 LINC00469Q8N7U9 141 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
VEGFA-224ENST00000523873 SEC11AP67812 179 aa8.2□□□□□ -1.1
VEGFA-224ENST00000523873 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
VEGFA-224ENST00000523873 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
VEGFA-224ENST00000523873 C2orf48Q96LS8 159 aa8.2□□□□□ -1.1
VEGFA-224ENST00000523873 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
VEGFA-224ENST00000523873 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
VEGFA-224ENST00000523873 A0A096LNI7 61 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 SPINK8P0C7L1 97 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 LINC01561Q8N1V8 128 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 IFI27L1Q96BM0 104 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-224ENST00000523873 CHAC1Q9BUX1 264 aa8.19□□□□□ -1.1
VEGFA-224ENST00000523873 IGLV5-45A0A087WSX0 123 aa8.18□□□□□ -1.1
VEGFA-224ENST00000523873 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
VEGFA-224ENST00000523873 IGLC3P0DOY3 106 aa8.18□□□□□ -1.1
VEGFA-224ENST00000523873 C11orf86A6NJI1 115 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 H0Y8G0 127 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 NDUFA1O15239 70 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 LEPROTL1O95214 131 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 FABP4P15090 132 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-224ENST00000523873 Q8N1X5 172 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 C6orf48Q9UBA6 75 aa8.17□□□□□ -1.1
VEGFA-224ENST00000523873 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
VEGFA-224ENST00000523873 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
VEGFA-224ENST00000523873 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms