RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-222	ENST00000523530	SPINK8	P0C7L1	97 aa		10.91	□□□□□ -0.66
DENND3-222	ENST00000523530	PRR34	Q9NV39	138 aa		10.91	□□□□□ -0.66
DENND3-222	ENST00000523530	DNAH10OS	P0CZ25	163 aa		10.9	□□□□□ -0.66
DENND3-222	ENST00000523530	XCL1	P47992	114 aa		10.9	□□□□□ -0.66
DENND3-222	ENST00000523530	ZFAND6	Q6FIF0	208 aa		10.9	□□□□□ -0.66
DENND3-222	ENST00000523530	PCP2	Q8IVA1	136 aa		10.9	□□□□□ -0.66
DENND3-222	ENST00000523530	UBE2W	Q96B02	151 aa		10.9	□□□□□ -0.66
DENND3-222	ENST00000523530	UPK3B	Q9BT76	320 aa		10.9	□□□□□ -0.66
DENND3-222	ENST00000523530	IGLV10-54	A0A075B6I4	117 aa		10.9	□□□□□ -0.67
DENND3-222	ENST00000523530	LEPROT	O15243	131 aa		10.9	□□□□□ -0.67
DENND3-222	ENST00000523530	DDT	P30046	118 aa		10.9	□□□□□ -0.67
DENND3-222	ENST00000523530	ENHO	Q6UWT2	76 aa		10.9	□□□□□ -0.67
DENND3-222	ENST00000523530	TRAV8-3	A0A0A6YYJ7	113 aa		10.89	□□□□□ -0.67
DENND3-222	ENST00000523530	IGHV1-58	A0A0C4DH39	117 aa		10.89	□□□□□ -0.67
DENND3-222	ENST00000523530	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.89	□□□□□ -0.67
DENND3-222	ENST00000523530	PLEKHB2	Q96CS7	222 aa		10.89	□□□□□ -0.67
DENND3-222	ENST00000523530	TTTY13	Q9BZ97	58 aa		10.89	□□□□□ -0.67
DENND3-222	ENST00000523530	TP73-AS1	Q9UF72	201 aa		10.89	□□□□□ -0.67
DENND3-222	ENST00000523530	LGALS3	P17931	250 aa	Known RBP	10.88	□□□□□ -0.67
DENND3-222	ENST00000523530	BOD1L2	Q8IYS8	172 aa		10.88	□□□□□ -0.67
DENND3-222	ENST00000523530	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.87	□□□□□ -0.67
DENND3-222	ENST00000523530		J3QQQ9	107 aa		10.87	□□□□□ -0.67
DENND3-222	ENST00000523530	HNRNPA3	P51991	378 aa	Known RBP	10.87	□□□□□ -0.67
DENND3-222	ENST00000523530	CD164L2	Q6UWJ8	174 aa		10.87	□□□□□ -0.67
DENND3-222	ENST00000523530	C5orf38	Q86SI9	138 aa		10.87	□□□□□ -0.67
DENND3-222	ENST00000523530	MUC7	Q8TAX7	377 aa		10.87	□□□□□ -0.67
DENND3-222	ENST00000523530	TRAV8-4	A0A0B4J246	113 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	SMIM1	B2RUZ4	78 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	DLEU1	O43261	78 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	MIA	Q16674	131 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530		Q9H8V8	135 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	FBN3	Q75N90	2809 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530		A0A087WZ39	114 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	ZNF815P	A8K554	130 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	TSPEAR-AS2	P59090	65 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	MAPKAPK5-AS1	Q8N8E1	139 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	WWC2-AS2	Q96NR7	200 aa		10.86	□□□□□ -0.67
DENND3-222	ENST00000523530	MYMX	A0A1B0GTQ4	84 aa		10.85	□□□□□ -0.67
DENND3-222	ENST00000523530	GAGE12H	A6NDE8	117 aa		10.84	□□□□□ -0.67
DENND3-222	ENST00000523530	COX7A2L	O14548	114 aa		10.84	□□□□□ -0.67
DENND3-222	ENST00000523530	C10orf126	Q8N4M7	172 aa		10.84	□□□□□ -0.67
DENND3-222	ENST00000523530	IGLV5-39	A0A0G2JS06	123 aa		10.83	□□□□□ -0.68
DENND3-222	ENST00000523530	MAL	P21145	153 aa		10.82	□□□□□ -0.68
DENND3-222	ENST00000523530	FOXI1	Q12951	378 aa		10.82	□□□□□ -0.68
DENND3-222	ENST00000523530	LINC01561	Q8N1V8	128 aa		10.82	□□□□□ -0.68
DENND3-222	ENST00000523530	C1orf43	Q9BWL3	253 aa		10.82	□□□□□ -0.68
DENND3-222	ENST00000523530	IBA57-AS1	B1ANH7	110 aa		10.82	□□□□□ -0.68
DENND3-222	ENST00000523530		Q9HAA7	133 aa		10.82	□□□□□ -0.68
DENND3-222	ENST00000523530	SCGB1D4	Q6XE38	83 aa		10.81	□□□□□ -0.68
DENND3-222	ENST00000523530	COX7B2	Q8TF08	81 aa		10.81	□□□□□ -0.68
DENND3-222	ENST00000523530	TOMM7	Q9P0U1	55 aa		10.81	□□□□□ -0.68
DENND3-222	ENST00000523530	CSMD3	Q7Z407	3707 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	IGKV2D-24	A0A075B6R9	120 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	LINC00587	B1AMM8	73 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530		K7EP13	123 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	C2orf91	Q6ZV80	131 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	NDUFA12	Q9UI09	145 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	DNAH7	Q8WXX0	4024 aa		10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.8	□□□□□ -0.68
DENND3-222	ENST00000523530	CTAG1A	P78358	180 aa		10.79	□□□□□ -0.68
DENND3-222	ENST00000523530	APOM	O95445	188 aa		10.78	□□□□□ -0.68
DENND3-222	ENST00000523530	PRSS2	P07478	247 aa		10.77	□□□□□ -0.68
DENND3-222	ENST00000523530	ORAOV1	Q8WV07	137 aa		10.77	□□□□□ -0.68
DENND3-222	ENST00000523530	RMI2	Q96E14	147 aa		10.77	□□□□□ -0.68
DENND3-222	ENST00000523530	HIGD1B	Q9P298	99 aa		10.77	□□□□□ -0.68
DENND3-222	ENST00000523530	NDUFA1	O15239	70 aa		10.77	□□□□□ -0.69
DENND3-222	ENST00000523530	C6orf226	Q5I0X4	101 aa		10.76	□□□□□ -0.69
DENND3-222	ENST00000523530	KRTAP26-1	Q6PEX3	210 aa		10.76	□□□□□ -0.69
DENND3-222	ENST00000523530	CFAP161	Q6P656	301 aa		10.75	□□□□□ -0.69
DENND3-222	ENST00000523530		Q8IZM0	81 aa		10.75	□□□□□ -0.69
DENND3-222	ENST00000523530		A0A0J9YXY3	114 aa		10.74	□□□□□ -0.69
DENND3-222	ENST00000523530	TTC32	Q5I0X7	151 aa		10.74	□□□□□ -0.69
DENND3-222	ENST00000523530	HERV-K104	P63124	156 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	SPAG11B	Q08648	103 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	HSD52	Q0P140	79 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	CASC10	Q5T4H9	136 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	SFTA2	Q6UW10	78 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	ZNF625	Q96I27	306 aa	Predicted RBP	10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	KRTAP1-5	Q9BYS1	174 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	STARD9	Q9P2P6	4700 aa		10.73	□□□□□ -0.69
DENND3-222	ENST00000523530	C3orf84	H3BNL1	204 aa		10.72	□□□□□ -0.69
DENND3-222	ENST00000523530	CKS1B	P61024	79 aa		10.72	□□□□□ -0.69
DENND3-222	ENST00000523530	HIST1H4G	Q99525	98 aa		10.72	□□□□□ -0.69
DENND3-222	ENST00000523530	NBDY	A0A0U1RRE5	68 aa		10.71	□□□□□ -0.69
DENND3-222	ENST00000523530	TMEM238	C9JI98	176 aa		10.71	□□□□□ -0.69
DENND3-222	ENST00000523530	HINT1	P49773	126 aa	Predicted RBP	10.71	□□□□□ -0.69
DENND3-222	ENST00000523530	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.71	□□□□□ -0.69
DENND3-222	ENST00000523530	COX11	Q9Y6N1	276 aa		10.71	□□□□□ -0.69
DENND3-222	ENST00000523530	CXCL5	P42830	114 aa		10.7	□□□□□ -0.7
DENND3-222	ENST00000523530	KIAA0087	Q14695	138 aa		10.7	□□□□□ -0.7
DENND3-222	ENST00000523530	BATF	Q16520	125 aa		10.7	□□□□□ -0.7
DENND3-222	ENST00000523530	MEIG1	Q5JSS6	88 aa		10.7	□□□□□ -0.7
DENND3-222	ENST00000523530	TM2D2	Q9BX73	214 aa		10.7	□□□□□ -0.7
DENND3-222	ENST00000523530	TG	P01266	2768 aa		10.7	□□□□□ -0.7
DENND3-222	ENST00000523530		M0R143	59 aa		10.69	□□□□□ -0.7
DENND3-222	ENST00000523530	CIRBP	Q14011	172 aa	Known RBP	10.69	□□□□□ -0.7
DENND3-222	ENST00000523530	TAL2	Q16559	108 aa		10.69	□□□□□ -0.7
DENND3-222	ENST00000523530	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.69	□□□□□ -0.7
DENND3-222	ENST00000523530	LYST	Q99698	3801 aa		10.69	□□□□□ -0.7
DENND3-222	ENST00000523530	ZNF561-AS1	K7EIQ3	104 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms