RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 IGHV3OR16-9A0A0B4J2B5 98 aa15.54■□□□□ 0.08
PVT1-219ENST00000523427 PPP1R2P9O14990 202 aa15.54■□□□□ 0.08
PVT1-219ENST00000523427 TMEM241Q24JQ0 296 aa15.54■□□□□ 0.08
PVT1-219ENST00000523427 KRTAP7-1Q8IUC3 87 aa15.54■□□□□ 0.08
PVT1-219ENST00000523427 ZNF727A8MUV8 499 aa15.53■□□□□ 0.08
PVT1-219ENST00000523427 F8WDY8 70 aa15.53■□□□□ 0.08
PVT1-219ENST00000523427 BLOC1S1P78537 153 aa15.53■□□□□ 0.08
PVT1-219ENST00000523427 ALKAL2Q6UX46 152 aa15.53■□□□□ 0.08
PVT1-219ENST00000523427 EIF5A2Q9GZV4 153 aaKnown RBP15.53■□□□□ 0.08
PVT1-219ENST00000523427 IFITM10A6NMD0 228 aa15.52■□□□□ 0.08
PVT1-219ENST00000523427 TLX1NBP0CAT3 122 aa15.52■□□□□ 0.08
PVT1-219ENST00000523427 FAM104AQ969W3 186 aa15.52■□□□□ 0.08
PVT1-219ENST00000523427 SMDT1Q9H4I9 107 aa15.52■□□□□ 0.08
PVT1-219ENST00000523427 V9GYV3 84 aa15.51■□□□□ 0.07
PVT1-219ENST00000523427 FAM104BQ5XKR9 115 aa15.5■□□□□ 0.07
PVT1-219ENST00000523427 TCTE3Q8IZS6 198 aa15.5■□□□□ 0.07
PVT1-219ENST00000523427 TSPAN13O95857 204 aa15.49■□□□□ 0.07
PVT1-219ENST00000523427 CKS2P33552 79 aa15.49■□□□□ 0.07
PVT1-219ENST00000523427 RPL13AP40429 203 aaKnown RBP15.49■□□□□ 0.07
PVT1-219ENST00000523427 HBBP68871 147 aa15.49■□□□□ 0.07
PVT1-219ENST00000523427 KRTAP9-2Q9BYQ4 174 aa15.49■□□□□ 0.07
PVT1-219ENST00000523427 A0A0U1RQV1 116 aa15.48■□□□□ 0.07
PVT1-219ENST00000523427 C20orf78Q9BR46 151 aa15.48■□□□□ 0.07
PVT1-219ENST00000523427 C2orf82Q6UX34 121 aa15.47■□□□□ 0.07
PVT1-219ENST00000523427 SPANXA1Q9NS26 97 aa15.47■□□□□ 0.07
PVT1-219ENST00000523427 NAT8BQ9UHF3 227 aa15.47■□□□□ 0.07
PVT1-219ENST00000523427 TGIF2-C20orf24A0A0A6YYL0 155 aa15.46■□□□□ 0.07
PVT1-219ENST00000523427 TCAPO15273 167 aa15.46■□□□□ 0.07
PVT1-219ENST00000523427 TNFRSF6BO95407 300 aa15.45■□□□□ 0.06
PVT1-219ENST00000523427 LINC00862A6NCI5 91 aa15.44■□□□□ 0.06
PVT1-219ENST00000523427 MRPS36P82909 103 aaKnown RBP15.44■□□□□ 0.06
PVT1-219ENST00000523427 KIAA0087Q14695 138 aa15.44■□□□□ 0.06
PVT1-219ENST00000523427 SMIM2Q9BVW6 85 aa15.44■□□□□ 0.06
PVT1-219ENST00000523427 SRP19P09132 144 aaKnown RBP15.43■□□□□ 0.06
PVT1-219ENST00000523427 C9orf129Q5T035 196 aaKnown RBP15.43■□□□□ 0.06
PVT1-219ENST00000523427 TRBV24-1A0A075B6N3 115 aa15.42■□□□□ 0.06
PVT1-219ENST00000523427 PACRGQ96M98 296 aaPredicted RBP15.42■□□□□ 0.06
PVT1-219ENST00000523427 RPL32P62910 135 aaKnown RBP15.41■□□□□ 0.06
PVT1-219ENST00000523427 D6R8Y8 96 aa15.4■□□□□ 0.06
PVT1-219ENST00000523427 NDUFC2-KCTD14E9PQ53 114 aa15.4■□□□□ 0.06
PVT1-219ENST00000523427 FAM74A3Q4VXF1 159 aa15.4■□□□□ 0.06
PVT1-219ENST00000523427 CARHSP1Q9Y2V2 147 aaKnown RBP15.4■□□□□ 0.06
PVT1-219ENST00000523427 TRBV30A0A0K0K1B3 111 aa15.39■□□□□ 0.05
PVT1-219ENST00000523427 ZNF861PO60384 105 aa15.39■□□□□ 0.05
PVT1-219ENST00000523427 NPYP01303 97 aa15.39■□□□□ 0.05
PVT1-219ENST00000523427 ADIRFQ15847 76 aa15.38■□□□□ 0.05
PVT1-219ENST00000523427 LINC00242Q5T6M2 205 aa15.38■□□□□ 0.05
PVT1-219ENST00000523427 IFI27P40305 119 aaPredicted RBP15.37■□□□□ 0.05
PVT1-219ENST00000523427 RPL23P62829 140 aaKnown RBP15.37■□□□□ 0.05
PVT1-219ENST00000523427 MRPL54Q6P161 138 aaKnown RBP15.37■□□□□ 0.05
PVT1-219ENST00000523427 LINC00469Q8N7U9 141 aa15.37■□□□□ 0.05
PVT1-219ENST00000523427 SMIM27A0A1W2PRY6 76 aa15.35■□□□□ 0.05
PVT1-219ENST00000523427 RAB5AP20339 215 aa15.34■□□□□ 0.05
PVT1-219ENST00000523427 TOMM7Q9P0U1 55 aa15.34■□□□□ 0.05
PVT1-219ENST00000523427 IGLV4-3A0A075B6K6 122 aa15.33■□□□□ 0.04
PVT1-219ENST00000523427 CTDSP1Q9GZU7 261 aa15.33■□□□□ 0.04
PVT1-219ENST00000523427 C22orf24Q9Y442 160 aa15.33■□□□□ 0.04
PVT1-219ENST00000523427 A0A1B0GW15 77 aa15.32■□□□□ 0.04
PVT1-219ENST00000523427 XAGE1AQ9HD64 81 aa15.32■□□□□ 0.04
PVT1-219ENST00000523427 F8W036 122 aa15.31■□□□□ 0.04
PVT1-219ENST00000523427 PRSS2P07478 247 aa15.31■□□□□ 0.04
PVT1-219ENST00000523427 ZC2HC1BQ5TFG8 222 aa15.31■□□□□ 0.04
PVT1-219ENST00000523427 A0A087X002 238 aa15.3■□□□□ 0.04
PVT1-219ENST00000523427 TMEM141Q96I45 108 aa15.3■□□□□ 0.04
PVT1-219ENST00000523427 CKS1BP61024 79 aa15.29■□□□□ 0.04
PVT1-219ENST00000523427 TEX43Q6ZNM6 134 aa15.29■□□□□ 0.04
PVT1-219ENST00000523427 NUPR1O60356 82 aa15.28■□□□□ 0.04
PVT1-219ENST00000523427 LBHQ53QV2 105 aaPredicted RBP15.28■□□□□ 0.04
PVT1-219ENST00000523427 TYMSOSQ8TAI1 123 aa15.28■□□□□ 0.04
PVT1-219ENST00000523427 PYGO1Q9Y3Y4 419 aa15.28■□□□□ 0.04
PVT1-219ENST00000523427 S100A8P05109 93 aa15.27■□□□□ 0.04
PVT1-219ENST00000523427 NAT8Q9UHE5 227 aa15.27■□□□□ 0.04
PVT1-219ENST00000523427 LOC389332A0A1B0GUA5 103 aa15.26■□□□□ 0.03
PVT1-219ENST00000523427 PPBPP02775 128 aa15.26■□□□□ 0.03
PVT1-219ENST00000523427 C6orf226Q5I0X4 101 aa15.26■□□□□ 0.03
PVT1-219ENST00000523427 AKAP14Q86UN6 197 aa15.26■□□□□ 0.03
PVT1-219ENST00000523427 TMEM136Q6ZRR5 245 aa15.25■□□□□ 0.03
PVT1-219ENST00000523427 ORMDL3Q8N138 153 aa15.25■□□□□ 0.03
PVT1-219ENST00000523427 PRELID3AQ96N28 172 aa15.25■□□□□ 0.03
PVT1-219ENST00000523427 C2orf88Q9BSF0 95 aa15.25■□□□□ 0.03
PVT1-219ENST00000523427 C9JQL5 133 aa15.24■□□□□ 0.03
PVT1-219ENST00000523427 CRYGAP11844 174 aa15.24■□□□□ 0.03
PVT1-219ENST00000523427 Q6ZN92 141 aa15.24■□□□□ 0.03
PVT1-219ENST00000523427 ANAPC11Q9NYG5 84 aa15.24■□□□□ 0.03
PVT1-219ENST00000523427 FAT4Q6V0I7 4981 aa15.24■□□□□ 0.03
PVT1-219ENST00000523427 A0A1B0GXF2 115 aa15.23■□□□□ 0.03
PVT1-219ENST00000523427 RPL28P46779 137 aaKnown RBP15.23■□□□□ 0.03
PVT1-219ENST00000523427 LCE2AQ5TA79 106 aaPredicted RBP15.23■□□□□ 0.03
PVT1-219ENST00000523427 LINC01561Q8N1V8 128 aa15.23■□□□□ 0.03
PVT1-219ENST00000523427 RETNLBQ9BQ08 111 aa15.23■□□□□ 0.03
PVT1-219ENST00000523427 ALKBH7Q9BT30 221 aaPredicted RBP15.23■□□□□ 0.03
PVT1-219ENST00000523427 hCG_2014768A0A024R1R8 64 aa15.21■□□□□ 0.03
PVT1-219ENST00000523427 MRPL55Q7Z7F7 128 aaKnown RBP15.21■□□□□ 0.03
PVT1-219ENST00000523427 VCX2Q9H322 139 aa15.21■□□□□ 0.03
PVT1-219ENST00000523427 BCE1O60756 84 aa15.2■□□□□ 0.02
PVT1-219ENST00000523427 RPL37AP8A6NKH3 93 aa15.19■□□□□ 0.02
PVT1-219ENST00000523427 LINC00173Q6ZV60 143 aa15.19■□□□□ 0.02
PVT1-219ENST00000523427 SRSF3P84103 164 aaKnown RBP15.18■□□□□ 0.02
PVT1-219ENST00000523427 CYSLTR1Q9Y271 337 aa15.18■□□□□ 0.02
PVT1-219ENST00000523427 C2orf66Q6UXQ4 117 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms