RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MUC4Q99102 2169 aa9.48□□□□□ -0.89
PCDHGB1-201ENST00000523390 H0YGX0 51 aa9.48□□□□□ -0.89
PCDHGB1-201ENST00000523390 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
PCDHGB1-201ENST00000523390 FREM2Q5SZK8 3169 aa9.47□□□□□ -0.89
PCDHGB1-201ENST00000523390 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
PCDHGB1-201ENST00000523390 LECT2O14960 151 aa9.47□□□□□ -0.89
PCDHGB1-201ENST00000523390 H7C423 109 aa9.46□□□□□ -0.89
PCDHGB1-201ENST00000523390 TIRAPP58753 221 aa9.46□□□□□ -0.89
PCDHGB1-201ENST00000523390 TM2D2Q9BX73 214 aa9.46□□□□□ -0.89
PCDHGB1-201ENST00000523390 MAST4O15021 2626 aa9.46□□□□□ -0.89
PCDHGB1-201ENST00000523390 C15orf53Q8NAA6 179 aa9.46□□□□□ -0.89
PCDHGB1-201ENST00000523390 DSCR8Q96T75 97 aa9.46□□□□□ -0.89
PCDHGB1-201ENST00000523390 UBE2D3P61077 147 aa9.46□□□□□ -0.9
PCDHGB1-201ENST00000523390 UBE2D2P62837 147 aa9.46□□□□□ -0.9
PCDHGB1-201ENST00000523390 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
PCDHGB1-201ENST00000523390 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
PCDHGB1-201ENST00000523390 UBL5Q9BZL1 73 aa9.46□□□□□ -0.9
PCDHGB1-201ENST00000523390 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
PCDHGB1-201ENST00000523390 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
PCDHGB1-201ENST00000523390 KLK5Q9Y337 293 aaPredicted RBP9.45□□□□□ -0.9
PCDHGB1-201ENST00000523390 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
PCDHGB1-201ENST00000523390 RETNQ9HD89 108 aa9.45□□□□□ -0.9
PCDHGB1-201ENST00000523390 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
PCDHGB1-201ENST00000523390 SPANXB1Q9NS25 103 aaPredicted RBP9.44□□□□□ -0.9
PCDHGB1-201ENST00000523390 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
PCDHGB1-201ENST00000523390 SPANXCQ9NY87 97 aa9.44□□□□□ -0.9
PCDHGB1-201ENST00000523390 Q8N2B8 174 aa9.43□□□□□ -0.9
PCDHGB1-201ENST00000523390 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
PCDHGB1-201ENST00000523390 TCL1BO95988 128 aa9.42□□□□□ -0.9
PCDHGB1-201ENST00000523390 IGKV2-24A0A0C4DH68 120 aa9.42□□□□□ -0.9
PCDHGB1-201ENST00000523390 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
PCDHGB1-201ENST00000523390 Q6ZSN1 163 aa9.41□□□□□ -0.9
PCDHGB1-201ENST00000523390 NANOS2P60321 138 aaKnown RBP9.41□□□□□ -0.9
PCDHGB1-201ENST00000523390 FOXI1Q12951 378 aa9.41□□□□□ -0.9
PCDHGB1-201ENST00000523390 A0A0B4J2C4 111 aa9.41□□□□□ -0.9
PCDHGB1-201ENST00000523390 LINC00959A0A1B0GUT2 108 aa9.41□□□□□ -0.9
PCDHGB1-201ENST00000523390 UBE2D1P51668 147 aa9.41□□□□□ -0.9
PCDHGB1-201ENST00000523390 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.9
PCDHGB1-201ENST00000523390 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.9
PCDHGB1-201ENST00000523390 CDK2AP2O75956 126 aa9.4□□□□□ -0.9
PCDHGB1-201ENST00000523390 TRAV10A0A0B4J240 114 aa9.4□□□□□ -0.91
PCDHGB1-201ENST00000523390 A0A0J9YWU9 116 aa9.4□□□□□ -0.91
PCDHGB1-201ENST00000523390 RBMY1FQ15415 496 aaKnown RBP9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 IGLV2-18A0A075B6J9 118 aa9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 IBA57-AS1B1ANH7 110 aa9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 LINC00694P0DN24 101 aa9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 LELP1Q5T871 98 aa9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 DIRC1Q969H9 104 aa9.39□□□□□ -0.91
PCDHGB1-201ENST00000523390 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
PCDHGB1-201ENST00000523390 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
PCDHGB1-201ENST00000523390 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
PCDHGB1-201ENST00000523390 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
PCDHGB1-201ENST00000523390 FHL2Q14192 279 aa9.37□□□□□ -0.91
PCDHGB1-201ENST00000523390 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
PCDHGB1-201ENST00000523390 SS18L2Q9UHA2 77 aa9.37□□□□□ -0.91
PCDHGB1-201ENST00000523390 H3BT86 120 aa9.37□□□□□ -0.91
PCDHGB1-201ENST00000523390 B5MCH6 92 aa9.36□□□□□ -0.91
PCDHGB1-201ENST00000523390 FSHBP01225 129 aa9.36□□□□□ -0.91
PCDHGB1-201ENST00000523390 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
PCDHGB1-201ENST00000523390 TEP1Q99973 2627 aaKnown RBP9.36□□□□□ -0.91
PCDHGB1-201ENST00000523390 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
PCDHGB1-201ENST00000523390 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
PCDHGB1-201ENST00000523390 COL6A3P12111 3177 aa9.35□□□□□ -0.91
PCDHGB1-201ENST00000523390 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
PCDHGB1-201ENST00000523390 TRIAP1O43715 76 aa9.35□□□□□ -0.91
PCDHGB1-201ENST00000523390 BOD1L1Q8NFC6 3051 aa9.34□□□□□ -0.91
PCDHGB1-201ENST00000523390 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB1-201ENST00000523390 Q6ZTC4 211 aa9.34□□□□□ -0.91
PCDHGB1-201ENST00000523390 TNRC18O15417 2968 aaPredicted RBP9.34□□□□□ -0.91
PCDHGB1-201ENST00000523390 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
PCDHGB1-201ENST00000523390 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
PCDHGB1-201ENST00000523390 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
PCDHGB1-201ENST00000523390 FHL3Q13643 280 aa9.33□□□□□ -0.92
PCDHGB1-201ENST00000523390 C11orf72Q8NBR9 251 aa9.32□□□□□ -0.92
PCDHGB1-201ENST00000523390 COX7BP24311 80 aa9.32□□□□□ -0.92
PCDHGB1-201ENST00000523390 hADV29S1A0JD25 119 aa9.32□□□□□ -0.92
PCDHGB1-201ENST00000523390 FAM19A4Q96LR4 140 aa9.32□□□□□ -0.92
PCDHGB1-201ENST00000523390 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
PCDHGB1-201ENST00000523390 COX6A2Q02221 97 aa9.32□□□□□ -0.92
PCDHGB1-201ENST00000523390 IGKV3D-7A0A0C4DH55 119 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 UBE2AP49459 152 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 RNF183Q96D59 192 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 TIMM17BO60830 172 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 SLPIP03973 132 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 LINC00315P59091 139 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 WDFY3Q8IZQ1 3526 aa9.31□□□□□ -0.92
PCDHGB1-201ENST00000523390 FUSP35637 526 aaKnown RBP eCLIP9.3□□□□□ -0.92
PCDHGB1-201ENST00000523390 C6orf99Q4VX62 202 aa9.3□□□□□ -0.92
PCDHGB1-201ENST00000523390 C14orf132Q9NPU4 83 aa9.3□□□□□ -0.92
PCDHGB1-201ENST00000523390 ACYP1P07311 99 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 AMELXQ99217 191 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 IGSF10Q6WRI0 2623 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 TRACP01848 142 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 HIGD2AQ9BW72 106 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 A0A096LNT2 108 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 TEX49A0A1B0GTD5 131 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms