RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 POLR2KP53803 58 aaKnown RBP2.36□□□□□ -2.03
NPM1-210ENST00000523339 TWIST1Q15672 202 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 PIK3CD-AS1Q5SR53 167 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 SDIM1Q6ZPB5 146 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 NIT1Q86X76 327 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 STPG4Q8N801 248 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 C18orf32Q8TCD1 76 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 SPACA4Q8TDM5 124 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 KCNS1Q96KK3 526 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 DNAJC30Q96LL9 226 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 PHLDA3Q9Y5J5 127 aa2.36□□□□□ -2.03
NPM1-210ENST00000523339 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 PRSS47A8MTI9 375 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 CIDEAO60543 219 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 SERF1AO75920 110 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 TNFRSF6BO95407 300 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 TSPAN13O95857 204 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 APCSP02743 223 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 MT-ND6P03923 174 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 MGPP08493 103 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 S100A4P26447 101 aaKnown RBP2.35□□□□□ -2.03
NPM1-210ENST00000523339 UBE2D3P61077 147 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 UBE2D2P62837 147 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 RIGQ13278 110 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 COA6Q5JTJ3 125 aaKnown RBP2.35□□□□□ -2.03
NPM1-210ENST00000523339 FAM74A4Q5TZK3 123 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 SPANXN1Q5VSR9 72 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 RASL11AQ6T310 242 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 PRR26Q8N8Z3 221 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 AP1S3Q96PC3 154 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 CHCHD7Q9BUK0 85 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 PLAC8Q9NZF1 115 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
NPM1-210ENST00000523339 LOC105371267A0A1B0GV96 52 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 XKRY2A2RUG3 117 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 TCAPO15273 167 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
NPM1-210ENST00000523339 COX6A2Q02221 97 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 PMCHL1Q16048 86 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 MIAQ16674 131 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 ZC2HC1BQ5TFG8 222 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 CLPSL2Q6UWE3 100 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 ZFP2Q6ZN57 461 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 HIST3H2BBQ8N257 126 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 PRELID3AQ96N28 172 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 CHCHD5Q9BSY4 110 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 LINC00474Q9P2X8 69 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 PKIGQ9Y2B9 76 aa2.34□□□□□ -2.03
NPM1-210ENST00000523339 IGLV10-54A0A075B6I4 117 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 IGHV1-24A0A0C4DH33 117 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 TRBV27A0A0K0K1C4 114 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 A0A1B0GW15 77 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 C5orf52A6NGY3 159 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 A8MWV9 139 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 ESDP10768 282 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 CRYGAP11844 174 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 S100PP25815 95 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 RAB4BP61018 213 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 PKIAP61925 76 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 CNBPP62633 177 aaKnown RBP2.33□□□□□ -2.04
NPM1-210ENST00000523339 RPL39P62891 51 aaKnown RBP2.33□□□□□ -2.04
NPM1-210ENST00000523339 RPL32P62910 135 aaKnown RBP2.33□□□□□ -2.04
NPM1-210ENST00000523339 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
NPM1-210ENST00000523339 ZNF56Q15929 161 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 PDZD11Q5EBL8 140 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 C1orf137Q5JT78 98 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 ORMDL3Q8N138 153 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 PRSS3P2Q8NHM4 247 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 DIRC1Q969H9 104 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 MRAP2Q96G30 205 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 OPRPNQ99935 248 aaPredicted RBP2.33□□□□□ -2.04
NPM1-210ENST00000523339 SMIM2Q9BVW6 85 aa2.33□□□□□ -2.04
NPM1-210ENST00000523339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.32□□□□□ -2.04
NPM1-210ENST00000523339 IGKV2-29A2NJV5 120 aaPredicted RBP2.32□□□□□ -2.04
NPM1-210ENST00000523339 SDHAF1A6NFY7 115 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 IGIPA6NJ69 53 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 RHODO00212 210 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 CKS2P33552 79 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 RPL13AP40429 203 aaKnown RBP2.32□□□□□ -2.04
NPM1-210ENST00000523339 NDUFA6P56556 154 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 SUMO2P61956 95 aaKnown RBP2.32□□□□□ -2.04
NPM1-210ENST00000523339 SNRPEP62304 92 aaKnown RBP2.32□□□□□ -2.04
NPM1-210ENST00000523339 C10orf25Q5T742 122 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 CFAP161Q6P656 301 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 ENHOQ6UWT2 76 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 Q8N8P6 123 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 HIST1H2BLQ99880 126 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 NIT2Q9NQR4 276 aa2.32□□□□□ -2.04
NPM1-210ENST00000523339 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 IGLV1-50A0A075B6I6 118 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 TRBV7-3A0A075B6L6 115 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 TRBV10-1A0A0K0K1A3 114 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 C1orf196B1AJZ1 125 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 RPL36AP83881 106 aaKnown RBP2.31□□□□□ -2.04
NPM1-210ENST00000523339 SRSF9Q13242 221 aaKnown RBP eCLIP2.31□□□□□ -2.04
NPM1-210ENST00000523339 COX19Q49B96 90 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms