RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SSPOA2VEC9 5147 aa7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 M0R2T5 61 aa7.71□□□□□ -1.18
NKX3-1-202ENST00000523261 TNFRSF6BO95407 300 aa7.71□□□□□ -1.18
NKX3-1-202ENST00000523261 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
NKX3-1-202ENST00000523261 SMIM15Q7Z3B0 74 aa7.71□□□□□ -1.18
NKX3-1-202ENST00000523261 FCGBPQ9Y6R7 5405 aaPredicted RBP7.7□□□□□ -1.18
NKX3-1-202ENST00000523261 A0A1B0GVG6 124 aa7.7□□□□□ -1.18
NKX3-1-202ENST00000523261 UPK1BO75841 260 aa7.7□□□□□ -1.18
NKX3-1-202ENST00000523261 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
NKX3-1-202ENST00000523261 A0A1B0GV50 99 aa7.69□□□□□ -1.18
NKX3-1-202ENST00000523261 SFT2D1Q8WV19 159 aa7.69□□□□□ -1.18
NKX3-1-202ENST00000523261 C11orf52Q96A22 123 aa7.69□□□□□ -1.18
NKX3-1-202ENST00000523261 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
NKX3-1-202ENST00000523261 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
NKX3-1-202ENST00000523261 RPL37AP8A6NKH3 93 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 ZNF727A8MUV8 499 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 UBE2AP49459 152 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 Q5BKY6 102 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 KCNRGQ8N5I3 272 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 SMIM12Q96EX1 92 aa7.68□□□□□ -1.18
NKX3-1-202ENST00000523261 USH2AO75445 5202 aa7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 FCER1GP30273 86 aa7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 NUDT10Q8NFP7 164 aa7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 NUDT11Q96G61 164 aa7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 LINC00167Q96N53 147 aa7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
NKX3-1-202ENST00000523261 GNG4P50150 75 aa7.65□□□□□ -1.18
NKX3-1-202ENST00000523261 CCL20P78556 96 aa7.65□□□□□ -1.18
NKX3-1-202ENST00000523261 DAND5Q8N907 189 aa7.65□□□□□ -1.18
NKX3-1-202ENST00000523261 TRBV20OR9-2A0A075B6H5 130 aa7.64□□□□□ -1.19
NKX3-1-202ENST00000523261 VCYO14598 125 aa7.64□□□□□ -1.19
NKX3-1-202ENST00000523261 TGIF2-C20orf24A0A0A6YYL0 155 aa7.63□□□□□ -1.19
NKX3-1-202ENST00000523261 IFITM3Q01628 133 aa7.63□□□□□ -1.19
NKX3-1-202ENST00000523261 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
NKX3-1-202ENST00000523261 FAM213BQ8TBF2 198 aa7.63□□□□□ -1.19
NKX3-1-202ENST00000523261 BIN3Q9NQY0 253 aa7.63□□□□□ -1.19
NKX3-1-202ENST00000523261 GAGE10A6NGK3 116 aa7.62□□□□□ -1.19
NKX3-1-202ENST00000523261 IGLV8-61A0A075B6I0 122 aa7.61□□□□□ -1.19
NKX3-1-202ENST00000523261 IFITM10A6NMD0 228 aa7.61□□□□□ -1.19
NKX3-1-202ENST00000523261 RPL39P62891 51 aaKnown RBP7.61□□□□□ -1.19
NKX3-1-202ENST00000523261 PNRC1Q12796 327 aaPredicted RBP7.61□□□□□ -1.19
NKX3-1-202ENST00000523261 TMEM18Q96B42 140 aa7.61□□□□□ -1.19
NKX3-1-202ENST00000523261 FXYD6-FXYD2A0A087WZ82 144 aa7.6□□□□□ -1.19
NKX3-1-202ENST00000523261 PRLHP81277 87 aa7.6□□□□□ -1.19
NKX3-1-202ENST00000523261 PCOTHQ58A44 107 aa7.6□□□□□ -1.19
NKX3-1-202ENST00000523261 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
NKX3-1-202ENST00000523261 KIR2DL4Q99706 377 aa7.6□□□□□ -1.19
NKX3-1-202ENST00000523261 RAB4AP20338 218 aa7.59□□□□□ -1.19
NKX3-1-202ENST00000523261 RPL32P62910 135 aaKnown RBP7.59□□□□□ -1.19
NKX3-1-202ENST00000523261 HBBP68871 147 aa7.59□□□□□ -1.19
NKX3-1-202ENST00000523261 MRPS36P82909 103 aaKnown RBP7.59□□□□□ -1.19
NKX3-1-202ENST00000523261 SYNE2Q8WXH0 6885 aaKnown RBP7.58□□□□□ -1.2
NKX3-1-202ENST00000523261 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
NKX3-1-202ENST00000523261 SUMO2P61956 95 aaKnown RBP7.58□□□□□ -1.2
NKX3-1-202ENST00000523261 NRACQ8N912 160 aa7.58□□□□□ -1.2
NKX3-1-202ENST00000523261 MANBALQ9NQG1 85 aa7.58□□□□□ -1.2
NKX3-1-202ENST00000523261 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
NKX3-1-202ENST00000523261 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 SPINK1P00995 79 aa7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 Q8NBF4 154 aa7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 TMEM191AQ9H0A3 160 aa7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 GNG13Q9P2W3 67 aa7.57□□□□□ -1.2
NKX3-1-202ENST00000523261 UMAD1C9J7I0 102 aa7.56□□□□□ -1.2
NKX3-1-202ENST00000523261 CKS1BP61024 79 aa7.56□□□□□ -1.2
NKX3-1-202ENST00000523261 AMN1Q8IY45 258 aa7.56□□□□□ -1.2
NKX3-1-202ENST00000523261 IGLV5-37A0A075B6J1 123 aa7.55□□□□□ -1.2
NKX3-1-202ENST00000523261 K7EN84 100 aa7.55□□□□□ -1.2
NKX3-1-202ENST00000523261 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
NKX3-1-202ENST00000523261 S100ZQ8WXG8 99 aa7.55□□□□□ -1.2
NKX3-1-202ENST00000523261 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 PRSS2P07478 247 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 GIPP09681 153 aaPredicted RBP7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 LINC00299Q6ZSB3 139 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 TOMM7Q9P0U1 55 aa7.54□□□□□ -1.2
NKX3-1-202ENST00000523261 PPP1R17O96001 155 aa7.53□□□□□ -1.2
NKX3-1-202ENST00000523261 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
NKX3-1-202ENST00000523261 Q8N377 158 aa7.53□□□□□ -1.2
NKX3-1-202ENST00000523261 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
NKX3-1-202ENST00000523261 MED9Q9NWA0 146 aa7.53□□□□□ -1.2
NKX3-1-202ENST00000523261 MACF1Q9UPN3 7388 aaKnown RBP7.53□□□□□ -1.2
NKX3-1-202ENST00000523261 OCC1Q8TAD7 63 aa7.52□□□□□ -1.21
NKX3-1-202ENST00000523261 SPRR4Q96PI1 79 aa7.52□□□□□ -1.21
NKX3-1-202ENST00000523261 A8MWL6 223 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 PPP1R2P9O14990 202 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 PDE6DO43924 150 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 SCO1O75880 301 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 CBLN2Q8IUK8 224 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 Q8IZM0 81 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 NKAPP1Q8N9T2 125 aa7.51□□□□□ -1.21
NKX3-1-202ENST00000523261 A0A1B0GUT8 65 aa7.5□□□□□ -1.21
NKX3-1-202ENST00000523261 F8VRH5 84 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms