RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	RETN	Q9HD89	108 aa		11.6	□□□□□ -0.55
FAM49B-223	ENST00000522746	IGKV3OR2-268	A0A0C4DH90	116 aa		11.59	□□□□□ -0.55
FAM49B-223	ENST00000522746	SMIM1	B2RUZ4	78 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746		K7EP34	96 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	ATP5G1	P05496	136 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	SPART-AS1	P0CW21	52 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	FABP2	P12104	132 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	LITAF	Q99732	161 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	IGLV5-39	A0A0G2JS06	123 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	TMEM238	C9JI98	176 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	PRB2	P02812	416 aa	Predicted RBP	11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746	SPCS1	Q9Y6A9	102 aa		11.58	□□□□□ -0.56
FAM49B-223	ENST00000522746		F5H768	121 aa		11.57	□□□□□ -0.56
FAM49B-223	ENST00000522746	APOM	O95445	188 aa		11.57	□□□□□ -0.56
FAM49B-223	ENST00000522746	TRAV26-1	A0A087WT03	109 aa		11.57	□□□□□ -0.56
FAM49B-223	ENST00000522746	GTF2H5	Q6ZYL4	71 aa		11.57	□□□□□ -0.56
FAM49B-223	ENST00000522746	HTN3	P15516	51 aa		11.56	□□□□□ -0.56
FAM49B-223	ENST00000522746	ADAMTSL4-AS1	Q5T5F5	129 aa		11.56	□□□□□ -0.56
FAM49B-223	ENST00000522746	MUSTN1	Q8IVN3	82 aa		11.56	□□□□□ -0.56
FAM49B-223	ENST00000522746	TMEM262	E9PQX1	116 aa		11.55	□□□□□ -0.56
FAM49B-223	ENST00000522746	CFC1B	P0CG36	223 aa		11.55	□□□□□ -0.56
FAM49B-223	ENST00000522746	CFC1	P0CG37	223 aa		11.55	□□□□□ -0.56
FAM49B-223	ENST00000522746	MDFI	Q99750	246 aa		11.55	□□□□□ -0.56
FAM49B-223	ENST00000522746	PGPEP1	Q9NXJ5	209 aa		11.55	□□□□□ -0.56
FAM49B-223	ENST00000522746	NBEAL1	Q6ZS30	2694 aa		11.55	□□□□□ -0.56
FAM49B-223	ENST00000522746		A4D1N5	150 aa		11.54	□□□□□ -0.56
FAM49B-223	ENST00000522746	NDUFA1	O15239	70 aa		11.54	□□□□□ -0.56
FAM49B-223	ENST00000522746	RBX1	P62877	108 aa		11.53	□□□□□ -0.56
FAM49B-223	ENST00000522746		Q9H8V8	135 aa		11.52	□□□□□ -0.56
FAM49B-223	ENST00000522746	TENM3	Q9P273	2699 aa		11.52	□□□□□ -0.56
FAM49B-223	ENST00000522746	EIF4EBP3	O60516	100 aa	Predicted RBP	11.52	□□□□□ -0.57
FAM49B-223	ENST00000522746	TSPAN13	O95857	204 aa		11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746	PRSS2	P07478	247 aa		11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746	RPL24	P83731	157 aa	Known RBP	11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746	ZNF625	Q96I27	306 aa	Predicted RBP	11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746	SPANXD	Q9BXN6	97 aa		11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746	SPANXC	Q9NY87	97 aa		11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746		A0A1B0GUV1	79 aa		11.51	□□□□□ -0.57
FAM49B-223	ENST00000522746	LINC00959	A0A1B0GUT2	108 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746	NPC2	P61916	151 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746	MIA	Q16674	131 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746	SFTA2	Q6UW10	78 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746	CLPSL2	Q6UWE3	100 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746		Q8N3U1	123 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746	DAND5	Q8N907	189 aa		11.5	□□□□□ -0.57
FAM49B-223	ENST00000522746	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.49	□□□□□ -0.57
FAM49B-223	ENST00000522746	MGAM2	Q2M2H8	2515 aa		11.49	□□□□□ -0.57
FAM49B-223	ENST00000522746	TIMM17B	O60830	172 aa		11.48	□□□□□ -0.57
FAM49B-223	ENST00000522746	MRPL23	Q16540	153 aa	Known RBP	11.48	□□□□□ -0.57
FAM49B-223	ENST00000522746	PRO1854	Q9UHT4	67 aa		11.48	□□□□□ -0.57
FAM49B-223	ENST00000522746	TEX48	A0A1B0GUV7	120 aa		11.47	□□□□□ -0.57
FAM49B-223	ENST00000522746	ICOS	Q9Y6W8	199 aa		11.47	□□□□□ -0.57
FAM49B-223	ENST00000522746		A0A0U1RRA0	63 aa		11.47	□□□□□ -0.57
FAM49B-223	ENST00000522746	C5orf38	Q86SI9	138 aa		11.47	□□□□□ -0.57
FAM49B-223	ENST00000522746		A0A0B4J2C4	111 aa		11.45	□□□□□ -0.58
FAM49B-223	ENST00000522746	COX7B2	Q8TF08	81 aa		11.45	□□□□□ -0.58
FAM49B-223	ENST00000522746	TOMM7	Q9P0U1	55 aa		11.45	□□□□□ -0.58
FAM49B-223	ENST00000522746		A0A087WZ39	114 aa		11.45	□□□□□ -0.58
FAM49B-223	ENST00000522746	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.45	□□□□□ -0.58
FAM49B-223	ENST00000522746	XCL1	P47992	114 aa		11.45	□□□□□ -0.58
FAM49B-223	ENST00000522746	LOC107984156	A0A0G2JMH3	177 aa		11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746		H3BMG7	143 aa		11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746	CIRBP	Q14011	172 aa	Known RBP	11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746	ARL17A	Q8IVW1	177 aa		11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746	LINC00269	Q8N2A0	174 aa		11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746	IGHV3-33	P01772	117 aa		11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746	SS18	Q15532	418 aa		11.44	□□□□□ -0.58
FAM49B-223	ENST00000522746	MEIG1	Q5JSS6	88 aa		11.43	□□□□□ -0.58
FAM49B-223	ENST00000522746		H7C2G1	150 aa		11.43	□□□□□ -0.58
FAM49B-223	ENST00000522746	ANG	P03950	147 aa	Known RBP	11.43	□□□□□ -0.58
FAM49B-223	ENST00000522746		Q6ZTC4	211 aa		11.43	□□□□□ -0.58
FAM49B-223	ENST00000522746	C11orf68	Q9H3H3	251 aa	Known RBP	11.43	□□□□□ -0.58
FAM49B-223	ENST00000522746	HERV-K104	P63124	156 aa		11.42	□□□□□ -0.58
FAM49B-223	ENST00000522746	LELP1	Q5T871	98 aa		11.42	□□□□□ -0.58
FAM49B-223	ENST00000522746		A0A0J9YWU9	116 aa		11.41	□□□□□ -0.58
FAM49B-223	ENST00000522746		K7EIL1	84 aa		11.41	□□□□□ -0.58
FAM49B-223	ENST00000522746	IFITM1	P13164	125 aa		11.41	□□□□□ -0.58
FAM49B-223	ENST00000522746	SH2D6	Q7Z4S9	175 aa		11.41	□□□□□ -0.58
FAM49B-223	ENST00000522746	LINC00308	Q8TCZ7	52 aa		11.41	□□□□□ -0.58
FAM49B-223	ENST00000522746	ERG28	Q9UKR5	140 aa		11.41	□□□□□ -0.58
FAM49B-223	ENST00000522746	REG3A	Q06141	175 aa		11.4	□□□□□ -0.58
FAM49B-223	ENST00000522746	MRAP	Q8TCY5	172 aa		11.4	□□□□□ -0.58
FAM49B-223	ENST00000522746	SOSTDC1	Q6X4U4	206 aa		11.4	□□□□□ -0.59
FAM49B-223	ENST00000522746	MTURN	Q8N3F0	131 aa		11.4	□□□□□ -0.59
FAM49B-223	ENST00000522746	IGLV10-54	A0A075B6I4	117 aa		11.39	□□□□□ -0.59
FAM49B-223	ENST00000522746	PSMB2	P49721	201 aa		11.39	□□□□□ -0.59
FAM49B-223	ENST00000522746	LYPD5	Q6UWN5	251 aa		11.39	□□□□□ -0.59
FAM49B-223	ENST00000522746	KPRP	Q5T749	579 aa	Predicted RBP	11.38	□□□□□ -0.59
FAM49B-223	ENST00000522746	DEFB121	Q5J5C9	76 aa		11.38	□□□□□ -0.59
FAM49B-223	ENST00000522746	NANOS2	P60321	138 aa	Known RBP	11.37	□□□□□ -0.59
FAM49B-223	ENST00000522746		Q1RN00	199 aa		11.37	□□□□□ -0.59
FAM49B-223	ENST00000522746	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.37	□□□□□ -0.59
FAM49B-223	ENST00000522746	TCL1B	O95988	128 aa		11.37	□□□□□ -0.59
FAM49B-223	ENST00000522746	OCIAD2	Q56VL3	154 aa		11.37	□□□□□ -0.59
FAM49B-223	ENST00000522746	WFDC2	Q14508	124 aa		11.36	□□□□□ -0.59
FAM49B-223	ENST00000522746		H3BNG1	76 aa		11.35	□□□□□ -0.59
FAM49B-223	ENST00000522746	SCGB1C2	P0DMR2	95 aa		11.35	□□□□□ -0.59
FAM49B-223	ENST00000522746	LYRM7	Q5U5X0	104 aa		11.35	□□□□□ -0.59
FAM49B-223	ENST00000522746	CD164L2	Q6UWJ8	174 aa		11.35	□□□□□ -0.59
FAM49B-223	ENST00000522746	PRO0461	Q9UI25	63 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms