RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 UBE2D1P51668 147 aa8.57□□□□□ -1.04
PABPC1-219ENST00000522387 HERVK_113P61574 105 aa8.57□□□□□ -1.04
PABPC1-219ENST00000522387 MRPL23Q16540 153 aaKnown RBP8.57□□□□□ -1.04
PABPC1-219ENST00000522387 KIR2DL4Q99706 377 aa8.57□□□□□ -1.04
PABPC1-219ENST00000522387 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
PABPC1-219ENST00000522387 UBE2D3P61077 147 aa8.56□□□□□ -1.04
PABPC1-219ENST00000522387 UBE2D2P62837 147 aa8.56□□□□□ -1.04
PABPC1-219ENST00000522387 PMVKQ15126 192 aa8.56□□□□□ -1.04
PABPC1-219ENST00000522387 PAPPA-AS1Q5QFB9 102 aa8.56□□□□□ -1.04
PABPC1-219ENST00000522387 DNAH1Q9P2D7 4330 aa8.56□□□□□ -1.04
PABPC1-219ENST00000522387 VCYO14598 125 aa8.55□□□□□ -1.04
PABPC1-219ENST00000522387 TSPAN13O95857 204 aa8.55□□□□□ -1.04
PABPC1-219ENST00000522387 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
PABPC1-219ENST00000522387 APOMO95445 188 aa8.55□□□□□ -1.04
PABPC1-219ENST00000522387 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
PABPC1-219ENST00000522387 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
PABPC1-219ENST00000522387 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
PABPC1-219ENST00000522387 TRBV27A0A0K0K1C4 114 aa8.54□□□□□ -1.04
PABPC1-219ENST00000522387 PSMB2P49721 201 aa8.54□□□□□ -1.04
PABPC1-219ENST00000522387 ESRGQ1W209 222 aa8.54□□□□□ -1.04
PABPC1-219ENST00000522387 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
PABPC1-219ENST00000522387 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
PABPC1-219ENST00000522387 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-219ENST00000522387 I3L3M4 83 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-219ENST00000522387 CASC10Q5T4H9 136 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 TMEM170BQ5T4T1 132 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 LYPD5Q6UWN5 251 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 Q8N3U1 123 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 DNAJC30Q96LL9 226 aa8.53□□□□□ -1.04
PABPC1-219ENST00000522387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-219ENST00000522387 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.05
PABPC1-219ENST00000522387 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-219ENST00000522387 FOXI1Q12951 378 aa8.52□□□□□ -1.05
PABPC1-219ENST00000522387 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
PABPC1-219ENST00000522387 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
PABPC1-219ENST00000522387 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
PABPC1-219ENST00000522387 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
PABPC1-219ENST00000522387 LYRM7Q5U5X0 104 aa8.52□□□□□ -1.05
PABPC1-219ENST00000522387 H3BNG1 76 aa8.51□□□□□ -1.05
PABPC1-219ENST00000522387 IGHV3-30P01768 117 aa8.51□□□□□ -1.05
PABPC1-219ENST00000522387 IGHV3-30-5P0DP03 117 aa8.51□□□□□ -1.05
PABPC1-219ENST00000522387 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
PABPC1-219ENST00000522387 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
PABPC1-219ENST00000522387 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
PABPC1-219ENST00000522387 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
PABPC1-219ENST00000522387 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
PABPC1-219ENST00000522387 CFC1BP0CG36 223 aa8.5□□□□□ -1.05
PABPC1-219ENST00000522387 CFC1P0CG37 223 aa8.5□□□□□ -1.05
PABPC1-219ENST00000522387 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
PABPC1-219ENST00000522387 J3QQQ9 107 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
PABPC1-219ENST00000522387 GAGE6Q13070 117 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 AMELXQ99217 191 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 TCL1BO95988 128 aa8.49□□□□□ -1.05
PABPC1-219ENST00000522387 KMT2CQ8NEZ4 4911 aaKnown RBP8.48□□□□□ -1.05
PABPC1-219ENST00000522387 CCL18P55774 89 aa8.48□□□□□ -1.05
PABPC1-219ENST00000522387 UBE2DNLQ8IWF7 75 aa8.48□□□□□ -1.05
PABPC1-219ENST00000522387 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
PABPC1-219ENST00000522387 C20orf203Q8NBC4 194 aa8.48□□□□□ -1.05
PABPC1-219ENST00000522387 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
PABPC1-219ENST00000522387 TRBV20-1A0A075B6N2 111 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 PRO1854Q9UHT4 67 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 DNAH10Q8IVF4 4471 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 A0A1B0GV72 72 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 UBE2L6O14933 153 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 LEPROTO15243 131 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 IGHV3-33P01772 117 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 IGHV3-30-3P0DP02 117 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 CDIP1Q9H305 208 aa8.47□□□□□ -1.05
PABPC1-219ENST00000522387 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.05
PABPC1-219ENST00000522387 TMEM223A0PJW6 202 aa8.46□□□□□ -1.05
PABPC1-219ENST00000522387 SCGB1C2P0DMR2 95 aa8.46□□□□□ -1.05
PABPC1-219ENST00000522387 TEN1Q86WV5 123 aa8.46□□□□□ -1.05
PABPC1-219ENST00000522387 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.05
PABPC1-219ENST00000522387 CARD19Q96LW7 228 aa8.46□□□□□ -1.05
PABPC1-219ENST00000522387 LY6G6CO95867 125 aa8.46□□□□□ -1.06
PABPC1-219ENST00000522387 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.06
PABPC1-219ENST00000522387 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
PABPC1-219ENST00000522387 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
PABPC1-219ENST00000522387 LELP1Q5T871 98 aa8.45□□□□□ -1.06
PABPC1-219ENST00000522387 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
PABPC1-219ENST00000522387 A4D1N5 150 aa8.45□□□□□ -1.06
PABPC1-219ENST00000522387 C3orf84H3BNL1 204 aa8.45□□□□□ -1.06
PABPC1-219ENST00000522387 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
PABPC1-219ENST00000522387 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
PABPC1-219ENST00000522387 IGLV4-3A0A075B6K6 122 aa8.44□□□□□ -1.06
PABPC1-219ENST00000522387 IGLV4-60A0A075B6I1 120 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 CKS1BP61024 79 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 Q9H8V8 135 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 M0R2N4 97 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
PABPC1-219ENST00000522387 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 MUSTN1Q8IVN3 82 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms