RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LCE6AA0A183 80 aa8.83□□□□□ -1
CPNE3-205ENST00000522240 LINC00959A0A1B0GUT2 108 aa8.83□□□□□ -1
CPNE3-205ENST00000522240 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
CPNE3-205ENST00000522240 IGKCP01834 107 aa8.83□□□□□ -1
CPNE3-205ENST00000522240 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
CPNE3-205ENST00000522240 Q9H8V8 135 aa8.83□□□□□ -1
CPNE3-205ENST00000522240 EPPK1P58107 5090 aaKnown RBP8.83□□□□□ -1
CPNE3-205ENST00000522240 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 A0A0J9YXV3 536 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 HERVK_113P63121 156 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 SS18Q15532 418 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 MIAQ16674 131 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 CLPSL2Q6UWE3 100 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 PMCHL2Q9BQD1 86 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
CPNE3-205ENST00000522240 IGLV5-45A0A087WSX0 123 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 TRAV8-4A0A0B4J246 113 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 C11orf86A6NJI1 115 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 IBA57-AS1B1ANH7 110 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 TTC32Q5I0X7 151 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 ENHOQ6UWT2 76 aa8.81□□□□□ -1
CPNE3-205ENST00000522240 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
CPNE3-205ENST00000522240 UBE2WQ96B02 151 aa8.8□□□□□ -1
CPNE3-205ENST00000522240 GEMIN7Q9H840 131 aaKnown RBP8.8□□□□□ -1
CPNE3-205ENST00000522240 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
CPNE3-205ENST00000522240 TRAV8-3A0A0A6YYJ7 113 aa8.78□□□□□ -1
CPNE3-205ENST00000522240 ATOH7Q8N100 152 aa8.78□□□□□ -1
CPNE3-205ENST00000522240 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
CPNE3-205ENST00000522240 LINC00476Q8WZB0 136 aa8.78□□□□□ -1
CPNE3-205ENST00000522240 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
CPNE3-205ENST00000522240 IGHV3OR16-9A0A0B4J2B5 98 aa8.77□□□□□ -1.01
CPNE3-205ENST00000522240 H3BRM9 83 aa8.77□□□□□ -1.01
CPNE3-205ENST00000522240 TMEM170BQ5T4T1 132 aa8.77□□□□□ -1.01
CPNE3-205ENST00000522240 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
CPNE3-205ENST00000522240 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
CPNE3-205ENST00000522240 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
CPNE3-205ENST00000522240 RMI2Q96E14 147 aa8.77□□□□□ -1.01
CPNE3-205ENST00000522240 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 XCL1P47992 114 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 HERVK_113P61574 105 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 COX6A2Q02221 97 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 VAMP8Q9BV40 100 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 C1orf43Q9BWL3 253 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 KRTAP1-5Q9BYS1 174 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 CDKN2A-AS1Q9UH64 79 aa8.76□□□□□ -1.01
CPNE3-205ENST00000522240 IGLV10-54A0A075B6I4 117 aa8.75□□□□□ -1.01
CPNE3-205ENST00000522240 A0A087WZ39 114 aa8.75□□□□□ -1.01
CPNE3-205ENST00000522240 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
CPNE3-205ENST00000522240 hDV102S1A0JD36 115 aa8.74□□□□□ -1.01
CPNE3-205ENST00000522240 S100A12P80511 92 aa8.74□□□□□ -1.01
CPNE3-205ENST00000522240 FOXI1Q12951 378 aa8.74□□□□□ -1.01
CPNE3-205ENST00000522240 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
CPNE3-205ENST00000522240 Q9HAA7 133 aa8.74□□□□□ -1.01
CPNE3-205ENST00000522240 COX11Q9Y6N1 276 aa8.74□□□□□ -1.01
CPNE3-205ENST00000522240 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 E9PLD3 99 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 COX7A2LO14548 114 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 LY6G6CO95867 125 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 LINC00518Q8N0U6 118 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 C12orf57Q99622 126 aa8.73□□□□□ -1.01
CPNE3-205ENST00000522240 IGKV2D-24A0A075B6R9 120 aa8.72□□□□□ -1.01
CPNE3-205ENST00000522240 IGLV5-39A0A0G2JS06 123 aa8.72□□□□□ -1.01
CPNE3-205ENST00000522240 MAJINQ3KP22 176 aa8.72□□□□□ -1.01
CPNE3-205ENST00000522240 STPG4Q8N801 248 aa8.72□□□□□ -1.01
CPNE3-205ENST00000522240 TM2D2Q9BX73 214 aa8.72□□□□□ -1.01
CPNE3-205ENST00000522240 PAM16Q9Y3D7 125 aa8.72□□□□□ -1.01
CPNE3-205ENST00000522240 IGHV1-58A0A0C4DH39 117 aa8.71□□□□□ -1.02
CPNE3-205ENST00000522240 SPINK8P0C7L1 97 aa8.71□□□□□ -1.02
CPNE3-205ENST00000522240 SPATA45Q537H7 98 aa8.71□□□□□ -1.02
CPNE3-205ENST00000522240 C5orf38Q86SI9 138 aa8.71□□□□□ -1.02
CPNE3-205ENST00000522240 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
CPNE3-205ENST00000522240 LEPROTO15243 131 aa8.7□□□□□ -1.02
CPNE3-205ENST00000522240 APOMO95445 188 aa8.7□□□□□ -1.02
CPNE3-205ENST00000522240 Q6ZR54 194 aa8.7□□□□□ -1.02
CPNE3-205ENST00000522240 PLEKHB2Q96CS7 222 aa8.7□□□□□ -1.02
CPNE3-205ENST00000522240 MALP21145 153 aa8.69□□□□□ -1.02
CPNE3-205ENST00000522240 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
CPNE3-205ENST00000522240 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
CPNE3-205ENST00000522240 J3QQQ9 107 aa8.67□□□□□ -1.02
CPNE3-205ENST00000522240 NMUP48645 174 aa8.67□□□□□ -1.02
CPNE3-205ENST00000522240 Q8IZM0 81 aa8.67□□□□□ -1.02
CPNE3-205ENST00000522240 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
CPNE3-205ENST00000522240 LGALS3P17931 250 aaKnown RBP8.66□□□□□ -1.02
CPNE3-205ENST00000522240 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
CPNE3-205ENST00000522240 C6orf223Q8N319 242 aa8.66□□□□□ -1.02
CPNE3-205ENST00000522240 COX7B2Q8TF08 81 aa8.66□□□□□ -1.02
CPNE3-205ENST00000522240 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
CPNE3-205ENST00000522240 HYDINQ4G0P3 5121 aa8.65□□□□□ -1.02
CPNE3-205ENST00000522240 M0R2N4 97 aa8.65□□□□□ -1.02
CPNE3-205ENST00000522240 COX8AP10176 69 aa8.65□□□□□ -1.02
CPNE3-205ENST00000522240 SPAG11BQ08648 103 aa8.65□□□□□ -1.02
CPNE3-205ENST00000522240 CFAP161Q6P656 301 aa8.65□□□□□ -1.02
CPNE3-205ENST00000522240 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
CPNE3-205ENST00000522240 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
CPNE3-205ENST00000522240 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms