RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 MALP21145 153 aa13.3□□□□□ -0.28
MCM4-211ENST00000520994 SRRM2Q9UQ35 2752 aaKnown RBP13.29□□□□□ -0.28
MCM4-211ENST00000520994 ZNF561-AS1K7EIQ3 104 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 HAMPP81172 84 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 FABP9Q0Z7S8 132 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 PAPPA-AS1Q5QFB9 102 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 PRSS3P2Q8NHM4 247 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 AMELXQ99217 191 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
MCM4-211ENST00000520994 F8WDY8 70 aa13.28□□□□□ -0.28
MCM4-211ENST00000520994 Q6ZN92 141 aa13.28□□□□□ -0.28
MCM4-211ENST00000520994 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
MCM4-211ENST00000520994 C2orf48Q96LS8 159 aa13.28□□□□□ -0.28
MCM4-211ENST00000520994 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.29
MCM4-211ENST00000520994 FAM19A3Q7Z5A8 133 aa13.27□□□□□ -0.29
MCM4-211ENST00000520994 OR10D4PQ8NGN7 298 aa13.27□□□□□ -0.29
MCM4-211ENST00000520994 C2orf88Q9BSF0 95 aa13.27□□□□□ -0.29
MCM4-211ENST00000520994 LINC01561Q8N1V8 128 aa13.26□□□□□ -0.29
MCM4-211ENST00000520994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.26□□□□□ -0.29
MCM4-211ENST00000520994 UBE2D1P51668 147 aa13.25□□□□□ -0.29
MCM4-211ENST00000520994 LINC00242Q5T6M2 205 aa13.25□□□□□ -0.29
MCM4-211ENST00000520994 ERASQ7Z444 233 aa13.25□□□□□ -0.29
MCM4-211ENST00000520994 C5orf38Q86SI9 138 aa13.25□□□□□ -0.29
MCM4-211ENST00000520994 VCX2Q9H322 139 aa13.25□□□□□ -0.29
MCM4-211ENST00000520994 TRAPPC1Q9Y5R8 145 aa13.25□□□□□ -0.29
MCM4-211ENST00000520994 PLA2G1BP04054 148 aaKnown RBP13.24□□□□□ -0.29
MCM4-211ENST00000520994 SYCNQ0VAF6 134 aa13.24□□□□□ -0.29
MCM4-211ENST00000520994 LINC00173Q6ZV60 143 aa13.24□□□□□ -0.29
MCM4-211ENST00000520994 LINC00528Q8N1L1 170 aa13.24□□□□□ -0.29
MCM4-211ENST00000520994 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
MCM4-211ENST00000520994 YPEL4Q96NS1 127 aa13.24□□□□□ -0.29
MCM4-211ENST00000520994 A0A087WZ39 114 aa13.23□□□□□ -0.29
MCM4-211ENST00000520994 SPACA4Q8TDM5 124 aa13.23□□□□□ -0.29
MCM4-211ENST00000520994 IGLV4-69A0A075B6H9 119 aa13.22□□□□□ -0.29
MCM4-211ENST00000520994 SEC11AP67812 179 aa13.22□□□□□ -0.29
MCM4-211ENST00000520994 COX6A2Q02221 97 aa13.22□□□□□ -0.29
MCM4-211ENST00000520994 PANO1I0J062 215 aa13.21□□□□□ -0.29
MCM4-211ENST00000520994 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
MCM4-211ENST00000520994 FA2HQ7L5A8 372 aa13.21□□□□□ -0.29
MCM4-211ENST00000520994 LINC00474Q9P2X8 69 aa13.21□□□□□ -0.29
MCM4-211ENST00000520994 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
MCM4-211ENST00000520994 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
MCM4-211ENST00000520994 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
MCM4-211ENST00000520994 LINC00526Q96FQ7 95 aa13.19□□□□□ -0.3
MCM4-211ENST00000520994 SCGB3A1Q96QR1 104 aa13.19□□□□□ -0.3
MCM4-211ENST00000520994 CAMK2N2Q96S95 79 aa13.19□□□□□ -0.3
MCM4-211ENST00000520994 PLAC8Q9NZF1 115 aa13.19□□□□□ -0.3
MCM4-211ENST00000520994 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
MCM4-211ENST00000520994 LINC00614P0C842 121 aa13.17□□□□□ -0.3
MCM4-211ENST00000520994 RAB5BP61020 215 aa13.17□□□□□ -0.3
MCM4-211ENST00000520994 Q6ZRU5 148 aa13.17□□□□□ -0.3
MCM4-211ENST00000520994 ORAOV1Q8WV07 137 aa13.17□□□□□ -0.3
MCM4-211ENST00000520994 MRPL35Q9NZE8 188 aaKnown RBP13.17□□□□□ -0.3
MCM4-211ENST00000520994 A0A087WYN8 130 aa13.16□□□□□ -0.3
MCM4-211ENST00000520994 HERVK_113P63121 156 aa13.16□□□□□ -0.3
MCM4-211ENST00000520994 LOC107984640A0A0U1RRK4 108 aa13.15□□□□□ -0.3
MCM4-211ENST00000520994 CHTF8P0CG12 524 aa13.15□□□□□ -0.3
MCM4-211ENST00000520994 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
MCM4-211ENST00000520994 KRTAP10-4P60372 401 aaPredicted RBP13.14□□□□□ -0.31
MCM4-211ENST00000520994 KIAA0087Q14695 138 aa13.14□□□□□ -0.31
MCM4-211ENST00000520994 URB1-AS1Q96HZ7 61 aa13.14□□□□□ -0.31
MCM4-211ENST00000520994 A0A096LNI7 61 aa13.13□□□□□ -0.31
MCM4-211ENST00000520994 NDUFA1O15239 70 aa13.13□□□□□ -0.31
MCM4-211ENST00000520994 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
MCM4-211ENST00000520994 DPH3Q96FX2 82 aa13.13□□□□□ -0.31
MCM4-211ENST00000520994 A0A096LNJ9 63 aa13.11□□□□□ -0.31
MCM4-211ENST00000520994 TLX1NBP0CAT3 122 aa13.11□□□□□ -0.31
MCM4-211ENST00000520994 PTTG1IPP53801 180 aa13.11□□□□□ -0.31
MCM4-211ENST00000520994 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
MCM4-211ENST00000520994 IGKV2-24A0A0C4DH68 120 aa13.1□□□□□ -0.31
MCM4-211ENST00000520994 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
MCM4-211ENST00000520994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.1□□□□□ -0.31
MCM4-211ENST00000520994 HBDP02042 147 aa13.1□□□□□ -0.31
MCM4-211ENST00000520994 PMVKQ15126 192 aa13.1□□□□□ -0.31
MCM4-211ENST00000520994 CBLN2Q8IUK8 224 aa13.1□□□□□ -0.31
MCM4-211ENST00000520994 GEMIN7Q9H840 131 aaKnown RBP13.1□□□□□ -0.31
MCM4-211ENST00000520994 MYCBP2O75592 4640 aa13.1□□□□□ -0.31
MCM4-211ENST00000520994 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
MCM4-211ENST00000520994 CST9LQ9H4G1 147 aa13.09□□□□□ -0.31
MCM4-211ENST00000520994 TRBV30A0A0K0K1B3 111 aa13.08□□□□□ -0.32
MCM4-211ENST00000520994 RPL37AP61513 92 aaKnown RBP13.08□□□□□ -0.32
MCM4-211ENST00000520994 Q8IZM0 81 aa13.08□□□□□ -0.32
MCM4-211ENST00000520994 STPG4Q8N801 248 aa13.08□□□□□ -0.32
MCM4-211ENST00000520994 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
MCM4-211ENST00000520994 CDKN2A-AS1Q9UH64 79 aa13.08□□□□□ -0.32
MCM4-211ENST00000520994 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
MCM4-211ENST00000520994 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
MCM4-211ENST00000520994 PKHD1L1Q86WI1 4243 aa13.06□□□□□ -0.32
MCM4-211ENST00000520994 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
MCM4-211ENST00000520994 ATP5LO75964 103 aa13.05□□□□□ -0.32
MCM4-211ENST00000520994 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
MCM4-211ENST00000520994 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
MCM4-211ENST00000520994 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
MCM4-211ENST00000520994 C6orf48Q9UBA6 75 aa13.05□□□□□ -0.32
MCM4-211ENST00000520994 PRSS2P07478 247 aa13.04□□□□□ -0.32
MCM4-211ENST00000520994 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
MCM4-211ENST00000520994 CXCL5P42830 114 aa13.03□□□□□ -0.32
MCM4-211ENST00000520994 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
MCM4-211ENST00000520994 IGLC3P0DOY3 106 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms