RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 C12orf57Q99622 126 aa0.03□□□□□ -2.4
SKP1-207ENST00000520417 C2orf88Q9BSF0 95 aa0.03□□□□□ -2.4
SKP1-207ENST00000520417 FLNAP21333 2647 aaKnown RBP0.03□□□□□ -2.4
SKP1-207ENST00000520417 PSME4Q14997 1843 aa0.03□□□□□ -2.4
SKP1-207ENST00000520417 SPTBN1Q01082 2364 aaKnown RBP0.03□□□□□ -2.41
SKP1-207ENST00000520417 HERC1Q15751 4861 aa0.03□□□□□ -2.41
SKP1-207ENST00000520417 BSNQ9UPA5 3926 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 SONP18583 2426 aaKnown RBP0.02□□□□□ -2.41
SKP1-207ENST00000520417 A0A1B0GWA3 101 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 NAP1L6A6NFF2 107 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 LINC00587B1AMM8 73 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 Q0VG73 95 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 CDC42SE2Q9NRR3 84 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 FAT3Q8TDW7 4589 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 C10orf71Q711Q0 1435 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 POLA1P09884 1462 aaPredicted RBP0.02□□□□□ -2.41
SKP1-207ENST00000520417 NCOR1O75376 2440 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 LRP6O75581 1613 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 NHSL1Q5SYE7 1610 aa0.02□□□□□ -2.41
SKP1-207ENST00000520417 PHLPP1O60346 1717 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 KDM3BQ7LBC6 1761 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 HIVEP1P15822 2718 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 HYDINQ4G0P3 5121 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 C20orf202A1L168 122 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 I3L2K1 104 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 COX6CP09669 75 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 C10orf113Q5VZT2 155 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 FAM223AQ8IWN6 122 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 PRO1854Q9UHT4 67 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 A2ML1A8K2U0 1454 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 LRRC37A2A6NM11 1700 aa0.01□□□□□ -2.41
SKP1-207ENST00000520417 ATRQ13535 2644 aa0□□□□□ -2.41
SKP1-207ENST00000520417 CRYM-AS1A6NIL9 109 aa0□□□□□ -2.41
SKP1-207ENST00000520417 KRTDAPP60985 99 aa0□□□□□ -2.41
SKP1-207ENST00000520417 FAM167A-AS1Q96KT0 104 aa0□□□□□ -2.41
SKP1-207ENST00000520417 FXYD6Q9H0Q3 95 aa0□□□□□ -2.41
SKP1-207ENST00000520417 SBF2Q86WG5 1849 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 BIVM-ERCC5R4GMW8 1640 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 SMG6Q86US8 1419 aaKnown RBP-0.01□□□□□ -2.41
SKP1-207ENST00000520417 SCAPERQ9BY12 1400 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 STAB2Q8WWQ8 2551 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 COX6B1P14854 86 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 SPRR1BP22528 89 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 SPRR4Q96PI1 79 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 PRO1933Q9H354 126 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
SKP1-207ENST00000520417 USH2AO75445 5202 aa-0.01□□□□□ -2.41
SKP1-207ENST00000520417 KIF21AQ7Z4S6 1674 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 MAP1BP46821 2468 aaKnown RBP-0.02□□□□□ -2.41
SKP1-207ENST00000520417 GVINP1Q7Z2Y8 2422 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 CSPG4Q6UVK1 2322 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 LOC730098B7Z3J9 87 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 H3BQ15 152 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 SEC11AP67812 179 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 HSD52Q0P140 79 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 LINC01600Q96MT4 127 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 VAMP8Q9BV40 100 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.02□□□□□ -2.41
SKP1-207ENST00000520417 ZFHX3Q15911 3703 aa-0.02□□□□□ -2.41
SKP1-207ENST00000520417 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 MYOM2P54296 1465 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 TCHHQ07283 1943 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 SETXQ7Z333 2677 aaKnown RBP-0.03□□□□□ -2.41
SKP1-207ENST00000520417 TRBV7-4A0A0J9YYF1 115 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 K7EQZ3 153 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 SPINK4O60575 86 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 UBE2D3P61077 147 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 UBE2D2P62837 147 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 CGREF1Q99674 301 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 ROBO1Q9Y6N7 1651 aa-0.03□□□□□ -2.41
SKP1-207ENST00000520417 PPRC1Q5VV67 1664 aaKnown RBP-0.04□□□□□ -2.42
SKP1-207ENST00000520417 hADV29S1A0JD25 119 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 FAM223BA6NKX1 122 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 TMEM262E9PQX1 116 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 SYS1-DBNDD2H3BUS1 97 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 GNGT2O14610 69 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 SAA2P0DJI9 122 aaPredicted RBP-0.04□□□□□ -2.42
SKP1-207ENST00000520417 S100PP25815 95 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 AP4S1Q9Y587 144 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 DOPEY1Q5JWR5 2465 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 RIF1Q5UIP0 2472 aaKnown RBP-0.04□□□□□ -2.42
SKP1-207ENST00000520417 SPTA1P02549 2419 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 WDR7Q9Y4E6 1490 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 FAT2Q9NYQ8 4349 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 NSD3Q9BZ95 1437 aa-0.04□□□□□ -2.42
SKP1-207ENST00000520417 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 KDM5AP29375 1690 aaKnown RBP-0.05□□□□□ -2.42
SKP1-207ENST00000520417 RIMS1Q86UR5 1692 aaKnown RBP-0.05□□□□□ -2.42
SKP1-207ENST00000520417 LAMC1P11047 1609 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 EP300Q09472 2414 aaPredicted RBP-0.05□□□□□ -2.42
SKP1-207ENST00000520417 BTAF1O14981 1849 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 C7orf77A4D0Y5 90 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 DEFB123Q8N688 67 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 LCN9Q8WX39 176 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 USMG5Q96IX5 58 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 URB1O60287 2271 aaKnown RBP-0.05□□□□□ -2.42
SKP1-207ENST00000520417 HSPG2P98160 4391 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 RAPGEF6Q8TEU7 1601 aa-0.05□□□□□ -2.42
SKP1-207ENST00000520417 HECTD1Q9ULT8 2610 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms