RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 Q6ZS46 218 aa8.88□□□□□ -0.99
ERGIC1-208ENST00000520399 ACACAQ13085 2346 aa8.88□□□□□ -0.99
ERGIC1-208ENST00000520399 CNOT1A5YKK6 2376 aaKnown RBP8.87□□□□□ -0.99
ERGIC1-208ENST00000520399 CD164L2Q6UWJ8 174 aa8.87□□□□□ -0.99
ERGIC1-208ENST00000520399 MED13Q9UHV7 2174 aa8.87□□□□□ -0.99
ERGIC1-208ENST00000520399 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
ERGIC1-208ENST00000520399 COX17Q14061 63 aa8.87□□□□□ -0.99
ERGIC1-208ENST00000520399 TECTAO75443 2155 aa8.87□□□□□ -0.99
ERGIC1-208ENST00000520399 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 GPR179Q6PRD1 2367 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 POLEQ07864 2286 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 LOC100131303A0A0U1RQF7 123 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 LY6G6DO95868 133 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 IGLV1-40P01703 118 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 PROK1P58294 105 aa8.86□□□□□ -0.99
ERGIC1-208ENST00000520399 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 LINC00482Q8N8I6 264 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 PTPRSQ13332 1948 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 BEAN1Q3B7T3 259 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 ARFGEF3Q5TH69 2177 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 MUC7Q8TAX7 377 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 ZGRF1Q86YA3 2104 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 LRP4O75096 1905 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 CACNA1BQ00975 2339 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
ERGIC1-208ENST00000520399 SBSPONQ8IVN8 264 aa8.84□□□□□ -0.99
ERGIC1-208ENST00000520399 PCDH15Q96QU1 1955 aa8.84□□□□□ -0.99
ERGIC1-208ENST00000520399 PRR9Q5T870 116 aa8.84□□□□□ -0.99
ERGIC1-208ENST00000520399 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -1
ERGIC1-208ENST00000520399 TSHBP01222 138 aa8.83□□□□□ -1
ERGIC1-208ENST00000520399 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
ERGIC1-208ENST00000520399 LELP1Q5T871 98 aa8.83□□□□□ -1
ERGIC1-208ENST00000520399 C18orf65Q6ZTR6 163 aa8.83□□□□□ -1
ERGIC1-208ENST00000520399 MED12LQ86YW9 2145 aa8.83□□□□□ -1
ERGIC1-208ENST00000520399 PCOTHQ58A44 107 aa8.83□□□□□ -1
ERGIC1-208ENST00000520399 ARHGAP21Q5T5U3 1957 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 KLLNB2CW77 178 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
ERGIC1-208ENST00000520399 DOCK10Q96BY6 2186 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 AKAP6Q13023 2319 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 NACAE9PAV3 2078 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 Q8N3U1 123 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 REG3GQ6UW15 175 aa8.82□□□□□ -1
ERGIC1-208ENST00000520399 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
ERGIC1-208ENST00000520399 POM121L12Q8N7R1 296 aa8.81□□□□□ -1
ERGIC1-208ENST00000520399 SMIM11BQ8TCY0 68 aa8.81□□□□□ -1
ERGIC1-208ENST00000520399 BBC3Q96PG8 261 aaPredicted RBP8.81□□□□□ -1
ERGIC1-208ENST00000520399 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
ERGIC1-208ENST00000520399 LINC01006Q8NI28 216 aa8.81□□□□□ -1
ERGIC1-208ENST00000520399 PCNX2A6NKB5 2137 aa8.8□□□□□ -1
ERGIC1-208ENST00000520399 LINC00337Q8N6G1 96 aa8.8□□□□□ -1
ERGIC1-208ENST00000520399 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
ERGIC1-208ENST00000520399 H0Y9P7 68 aa8.8□□□□□ -1
ERGIC1-208ENST00000520399 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
ERGIC1-208ENST00000520399 CDSNQ15517 529 aa8.8□□□□□ -1
ERGIC1-208ENST00000520399 ROS1P08922 2347 aa8.79□□□□□ -1
ERGIC1-208ENST00000520399 C1orf137Q5JT78 98 aa8.79□□□□□ -1
ERGIC1-208ENST00000520399 DSCAML1Q8TD84 2053 aa8.79□□□□□ -1
ERGIC1-208ENST00000520399 ATG2AQ2TAZ0 1938 aa8.79□□□□□ -1
ERGIC1-208ENST00000520399 DOPEY2Q9Y3R5 2298 aa8.79□□□□□ -1
ERGIC1-208ENST00000520399 PRLHP81277 87 aa8.78□□□□□ -1
ERGIC1-208ENST00000520399 LINC00959A0A1B0GUT2 108 aa8.78□□□□□ -1
ERGIC1-208ENST00000520399 ABCA1O95477 2261 aa8.78□□□□□ -1
ERGIC1-208ENST00000520399 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
ERGIC1-208ENST00000520399 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
ERGIC1-208ENST00000520399 LINC00846Q9NV44 126 aa8.78□□□□□ -1
ERGIC1-208ENST00000520399 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
ERGIC1-208ENST00000520399 SPAG11AQ6PDA7 123 aa8.77□□□□□ -1.01
ERGIC1-208ENST00000520399 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1.01
ERGIC1-208ENST00000520399 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
ERGIC1-208ENST00000520399 PCNX3Q9H6A9 2034 aa8.76□□□□□ -1.01
ERGIC1-208ENST00000520399 CADP27708 2225 aa8.76□□□□□ -1.01
ERGIC1-208ENST00000520399 KIAA1549Q9HCM3 1950 aa8.76□□□□□ -1.01
ERGIC1-208ENST00000520399 COL5A1P20908 1838 aaPredicted RBP8.75□□□□□ -1.01
ERGIC1-208ENST00000520399 WNK2Q9Y3S1 2297 aa8.75□□□□□ -1.01
ERGIC1-208ENST00000520399 Q8IZM0 81 aa8.75□□□□□ -1.01
ERGIC1-208ENST00000520399 GVINP1Q7Z2Y8 2422 aa8.75□□□□□ -1.01
ERGIC1-208ENST00000520399 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
ERGIC1-208ENST00000520399 SPTBN1Q01082 2364 aaKnown RBP8.75□□□□□ -1.01
ERGIC1-208ENST00000520399 NCOA6Q14686 2063 aaPredicted RBP8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 A0A1B0GU69 56 aa8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 Q9BRP9 147 aa8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 UTRNP46939 3433 aa8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 A0A096LNJ9 63 aa8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 CNFNQ9BYD5 112 aa8.74□□□□□ -1.01
ERGIC1-208ENST00000520399 FREM1Q5H8C1 2179 aa8.73□□□□□ -1.01
ERGIC1-208ENST00000520399 AVPP01185 164 aa8.73□□□□□ -1.01
ERGIC1-208ENST00000520399 GAS8-AS1O95177 125 aa8.73□□□□□ -1.01
ERGIC1-208ENST00000520399 SPTBN2O15020 2390 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 C8orf87E5RJ46 101 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 PLCE1Q9P212 2302 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 HCG22E2RYF7 251 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 PRM2P04554 102 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 LCA10Q71F78 164 aa8.72□□□□□ -1.01
ERGIC1-208ENST00000520399 ABCA4P78363 2273 aa8.71□□□□□ -1.01
ERGIC1-208ENST00000520399 EGFEM1PQ0D2K5 195 aa8.71□□□□□ -1.02
ERGIC1-208ENST00000520399 CPAMD8Q8IZJ3 1885 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms