RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 C5orf38Q86SI9 138 aa3.75□□□□□ -1.81
CTNNA1-217ENST00000519634 OR10D4PQ8NGN7 298 aa3.75□□□□□ -1.81
CTNNA1-217ENST00000519634 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
CTNNA1-217ENST00000519634 MARVELD1Q9BSK0 173 aa3.75□□□□□ -1.81
CTNNA1-217ENST00000519634 SMDT1Q9H4I9 107 aa3.75□□□□□ -1.81
CTNNA1-217ENST00000519634 IFNA1P01562 189 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 RPL35P42766 123 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 TMEM241Q24JQ0 296 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 GAGE2EQ4V326 116 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 SMIM15Q7Z3B0 74 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 KRTAP7-1Q8IUC3 87 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 C9orf62Q8N4C0 152 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 GAGE2DQ9UEU5 116 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 ALG5Q9Y673 324 aa3.74□□□□□ -1.81
CTNNA1-217ENST00000519634 IGLV5-37A0A075B6J1 123 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 TRAV13-1A0A0B4J241 112 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 C7orf77A4D0Y5 90 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 TSHBP01222 138 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 CTRLP40313 264 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 DEFA1P59665 94 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 SMAGPQ0VAQ4 97 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 CNFNQ9BYD5 112 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 TMEM242Q9NWH2 141 aa3.73□□□□□ -1.81
CTNNA1-217ENST00000519634 CENPWQ5EE01 88 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 LINC00337Q8N6G1 96 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 ORAOV1Q8WV07 137 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 SMIM12Q96EX1 92 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 ST20Q9HBF5 79 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 CYTL1Q9NRR1 136 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 C6orf48Q9UBA6 75 aa3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 CSDC2Q9Y534 153 aaKnown RBP3.72□□□□□ -1.81
CTNNA1-217ENST00000519634 UPK1BO75841 260 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 CFC1BP0CG36 223 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 KCNRGQ8N5I3 272 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 SFT2D1Q8WV19 159 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 S100ZQ8WXG8 99 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 BIN3Q9NQY0 253 aa3.71□□□□□ -1.82
CTNNA1-217ENST00000519634 TRBV27A0A0K0K1C4 114 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 BCE1O60756 84 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 RNASE13Q5GAN3 156 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 LINC00299Q6ZSB3 139 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 FP248Q71RG6 208 aaPredicted RBP3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 MBD3L1Q8WWY6 194 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 C11orf52Q96A22 123 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
CTNNA1-217ENST00000519634 FXYD6-FXYD2A0A087WZ82 144 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 IGKV2D-26A0A0A0MRZ7 120 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 TRBV30A0A0K0K1B3 111 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 A0A1B0GV50 99 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 FCER1GP30273 86 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 GNG4P50150 75 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 POLR2KP53803 58 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 FOXA3P55318 350 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 CCL20P78556 96 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 FAM213BQ8TBF2 198 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 PACRGQ96M98 296 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 RNASE7Q9H1E1 156 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 UBE2D4Q9Y2X8 147 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 C22orf24Q9Y442 160 aa3.69□□□□□ -1.82
CTNNA1-217ENST00000519634 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 RAB19A4D1S5 217 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 UMAD1C9J7I0 102 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 VCYO14598 125 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 IFITM3Q01628 133 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 Q5BKY6 102 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 Q6ZUT4 128 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 MANBALQ9NQG1 85 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 TP73-AS1Q9UF72 201 aa3.68□□□□□ -1.82
CTNNA1-217ENST00000519634 SCGB1D1O95968 90 aa3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 GIPP09681 153 aaPredicted RBP3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 PAPPA-AS1Q5QFB9 102 aa3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 NDUFA13Q9P0J0 144 aa3.67□□□□□ -1.82
CTNNA1-217ENST00000519634 TGIF2-C20orf24A0A0A6YYL0 155 aa3.66□□□□□ -1.82
CTNNA1-217ENST00000519634 UBE2AP49459 152 aa3.66□□□□□ -1.82
CTNNA1-217ENST00000519634 MT1HP80294 61 aa3.66□□□□□ -1.82
CTNNA1-217ENST00000519634 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-217ENST00000519634 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
CTNNA1-217ENST00000519634 GNG13Q9P2W3 67 aa3.66□□□□□ -1.82
CTNNA1-217ENST00000519634 TRBV20OR9-2A0A075B6H5 130 aa3.65□□□□□ -1.83
CTNNA1-217ENST00000519634 A0A1B0GVG6 124 aa3.65□□□□□ -1.83
CTNNA1-217ENST00000519634 IFITM10A6NMD0 228 aa3.65□□□□□ -1.83
CTNNA1-217ENST00000519634 ZNF727A8MUV8 499 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms