RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 AP3S1Q92572 193 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 LSM5Q9Y4Y9 91 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 IGHV3OR16-9A0A0B4J2B5 98 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 ZNF727A8MUV8 499 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 APCSP02743 223 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 SMIM17P0DL12 118 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 TAS2R45P59539 299 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 DEFA1P59665 94 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 NCS1P62166 190 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 RPL32P62910 135 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 HBG1P69891 147 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 HBG2P69892 147 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 TMEM101Q96IK0 257 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 AP1S3Q96PC3 154 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 WDR61Q9GZS3 305 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 CYTL1Q9NRR1 136 aa3.24□□□□□ -1.89
CTNNA1-216ENST00000519489 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 TRBV30A0A0K0K1B3 111 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 MRPS10P82664 201 aaKnown RBP3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 MOBPQ13875 183 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 ATP6V1FQ16864 119 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 FAM19A1Q7Z5A9 133 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 MRPL52Q86TS9 123 aaKnown RBP3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 GATD1Q8NB37 220 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
CTNNA1-216ENST00000519489 M0R378 163 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 NCR2O95944 276 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 IL18Q14116 193 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 KIAA1644Q3SXP7 199 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 STX12Q86Y82 276 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 CBLN2Q8IUK8 224 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 BTF3L4Q96K17 158 aa3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 MRPS26Q9BYN8 205 aaKnown RBP3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 RNASE7Q9H1E1 156 aaKnown RBP3.22□□□□□ -1.89
CTNNA1-216ENST00000519489 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 RGS5O15539 181 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 NOL3O60936 208 aaKnown RBP3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 MT1BP07438 61 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 VBP1P61758 197 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 PQLC2Q6ZP29 291 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 HIGD2AQ9BW72 106 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 TMEM126AQ9H061 195 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 KCNIP2Q9NS61 270 aa3.21□□□□□ -1.9
CTNNA1-216ENST00000519489 FAM25EA8MYX2 175 aa3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 C17orf112F2Z3M2 114 aa3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 CTDSP2O14595 271 aa3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 CXCL1P09341 107 aa3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 PVALBP20472 110 aaPredicted RBP3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 IL15RAQ13261 267 aa3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 Q6ZUT4 128 aa3.2□□□□□ -1.9
CTNNA1-216ENST00000519489 IGLV5-37A0A075B6J1 123 aa3.19□□□□□ -1.9
CTNNA1-216ENST00000519489 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
CTNNA1-216ENST00000519489 PEX7O00628 323 aa3.19□□□□□ -1.9
CTNNA1-216ENST00000519489 GCHFRP30047 84 aa3.19□□□□□ -1.9
CTNNA1-216ENST00000519489 FAUP35544 74 aaKnown RBP3.19□□□□□ -1.9
CTNNA1-216ENST00000519489 TMEM242Q9NWH2 141 aa3.19□□□□□ -1.9
CTNNA1-216ENST00000519489 A0A1W2PPV4 95 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 SDHAF1A6NFY7 115 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 PRSS2P07478 247 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 MZT2BQ6NZ67 158 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 GNB1LQ9BYB4 327 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 ZFP30Q9Y2G7 519 aa3.18□□□□□ -1.9
CTNNA1-216ENST00000519489 LTAP01374 205 aa3.17□□□□□ -1.9
CTNNA1-216ENST00000519489 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
CTNNA1-216ENST00000519489 STAG3L2P0CL84 134 aa3.17□□□□□ -1.9
CTNNA1-216ENST00000519489 STAG3L3P0CL85 134 aa3.17□□□□□ -1.9
CTNNA1-216ENST00000519489 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CTNNA1-216ENST00000519489 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
CTNNA1-216ENST00000519489 MRAP2Q96G30 205 aa3.16□□□□□ -1.9
CTNNA1-216ENST00000519489 CCDC32Q9BV29 185 aa3.16□□□□□ -1.9
CTNNA1-216ENST00000519489 TOMM5Q8N4H5 51 aa3.15□□□□□ -1.91
CTNNA1-216ENST00000519489 TPPP3Q9BW30 176 aa3.15□□□□□ -1.91
CTNNA1-216ENST00000519489 GEMIN7Q9H840 131 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-216ENST00000519489 MED9Q9NWA0 146 aa3.15□□□□□ -1.91
CTNNA1-216ENST00000519489 I3L3M4 83 aa3.14□□□□□ -1.91
CTNNA1-216ENST00000519489 PMCHP20382 165 aa3.14□□□□□ -1.91
CTNNA1-216ENST00000519489 AP3S2P59780 193 aa3.14□□□□□ -1.91
CTNNA1-216ENST00000519489 Q8NDZ9 215 aa3.14□□□□□ -1.91
CTNNA1-216ENST00000519489 FUNDC2Q9BWH2 189 aa3.14□□□□□ -1.91
CTNNA1-216ENST00000519489 RAB26Q9ULW5 256 aa3.14□□□□□ -1.91
CTNNA1-216ENST00000519489 A0A1W2PRE2 83 aa3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 INMT-MINDY4F8WBC2 141 aa3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 SCGB1C1Q8TD33 95 aa3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 SMCR5Q8TEV8 140 aa3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 VCX3BQ9H321 246 aa3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 CSDC2Q9Y534 153 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-216ENST00000519489 C7orf77A4D0Y5 90 aa3.12□□□□□ -1.91
CTNNA1-216ENST00000519489 NDUFB6O95139 128 aa3.12□□□□□ -1.91
CTNNA1-216ENST00000519489 CDC34P49427 236 aaPredicted RBP3.12□□□□□ -1.91
CTNNA1-216ENST00000519489 UBE2G1P62253 170 aa3.12□□□□□ -1.91
CTNNA1-216ENST00000519489 FAM231DQ6ZW35 169 aa3.12□□□□□ -1.91
CTNNA1-216ENST00000519489 ZNF706Q9Y5V0 76 aaPredicted RBP3.12□□□□□ -1.91
CTNNA1-216ENST00000519489 TRBV6-5A0A0K0K1A5 114 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 FAM74A7A6NL05 159 aa3.11□□□□□ -1.91
CTNNA1-216ENST00000519489 ERC2-IT1O76042 136 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms