RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 K7EQG2 157 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 RS1O15537 224 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 KRTAP1-4P0C5Y4 121 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 SAA4P35542 130 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 LINC00158P58513 81 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 RBM3P98179 157 aaKnown RBP2.44□□□□□ -2.02
CSMD3-209ENST00000519485 COX17Q14061 63 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 C4orf26Q17RF5 130 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 HIGD2BQ4VC39 106 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 C1orf195Q5TG92 126 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 Q5XG85 94 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 C20orf197Q8N268 126 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 COX7B2Q8TF08 81 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 DSCR8Q96T75 97 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 CHCHD7Q9BUK0 85 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 C14orf132Q9NPU4 83 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 LINC00846Q9NV44 126 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 CEP350Q5VT06 3117 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 PRRC2AP48634 2157 aaKnown RBP2.43□□□□□ -2.02
CSMD3-209ENST00000519485 LOC110117498A0A087WWA1 95 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 A0A1B0GW54 56 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 K7EQD1 137 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 LECT2O14960 151 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 INSP01308 110 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 PRB4P10163 310 aaPredicted RBP2.43□□□□□ -2.02
CSMD3-209ENST00000519485 LINC00242Q5T6M2 205 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 ZGRF1Q86YA3 2104 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 SMIM11BQ8TCY0 68 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 FAM218AQ96MZ4 157 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 LINC00167Q96N53 147 aa2.43□□□□□ -2.02
CSMD3-209ENST00000519485 TRAV23DV6A0A075B6W5 121 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 TRBV6-4A0A1B0GX49 114 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 A8MTW9 85 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 LYNX1G3V0Z9 82 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 J3QLI3 93 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 CCL24O00175 119 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 LY6G6DO95868 133 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 TRBV12-3P01733 135 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 LYNX1P0DP58 116 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 MIFP14174 115 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 SEC61GP60059 68 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 SPINK13Q1W4C9 94 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 C6orf226Q5I0X4 101 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 UNQ9165/PRO28630Q6UXU0 137 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 MIR7-3HGQ8N6C7 128 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 LINC00612Q8N6U2 182 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 Q8N814 137 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 Q9HAA7 133 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 CDC42SE2Q9NRR3 84 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 ZNF318Q5VUA4 2279 aa2.42□□□□□ -2.02
CSMD3-209ENST00000519485 PLXNB1O43157 2135 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 FAM186AA6NE01 2351 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 IGKV3-7A0A075B6H7 116 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.41□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV3OR16-12A0A075B7B8 117 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV4-30-2A0A087WSY4 118 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 A0A1W2PPR1 153 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 IGKV2-29A2NJV5 120 aaPredicted RBP2.41□□□□□ -2.02
CSMD3-209ENST00000519485 A6NDX4 124 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 H7BZZ5 65 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 SS18Q15532 418 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 C11orf71Q6IPW1 123 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 ENHOQ6UWT2 76 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 Q8N2B8 174 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 HTTP42858 3142 aa2.41□□□□□ -2.02
CSMD3-209ENST00000519485 A0A087WZ39 114 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 A0A0U1RRA0 63 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 PLAC8L1A1L4L8 177 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 NCR3O14931 201 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 NDUFB1O75438 58 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 IGHV3-11P01762 117 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 NBL1P41271 181 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 CCL18P55774 89 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 HAMPP81172 84 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 COX6A2Q02221 97 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 PRB3Q04118 309 aaPredicted RBP2.4□□□□□ -2.03
CSMD3-209ENST00000519485 C9orf66Q5T8R8 295 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 SOSTDC1Q6X4U4 206 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 LINC00336Q6ZUF6 198 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 STHQ8IWL8 128 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 Q8IZM0 81 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 LINC00337Q8N6G1 96 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 LINC01560Q8TB33 94 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 UBE2E2Q96LR5 201 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 C22orf24Q9Y442 160 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 ARFGEF3Q5TH69 2177 aa2.4□□□□□ -2.03
CSMD3-209ENST00000519485 CHD9Q3L8U1 2897 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 MUC4Q99102 2169 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 IGKV2-28A0A075B6P5 120 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 A0A087WVE0 104 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 IGHV3-73A0A0B4J1V6 119 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 F8WEM9 126 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 CCL21O00585 134 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 IGKV2D-28P01615 120 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 HTN1P15515 57 aa2.39□□□□□ -2.03
CSMD3-209ENST00000519485 FUSP35637 526 aaKnown RBP eCLIP2.39□□□□□ -2.03
CSMD3-209ENST00000519485 PMAIP1Q13794 54 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms