RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 HAMPP81172 84 aa13.19□□□□□ -0.3
TNFRSF10B-204ENST00000519028 IGHV3OR16-9A0A0B4J2B5 98 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 RAB5BP61020 215 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 SDIM1Q6ZPB5 146 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 C5orf38Q86SI9 138 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 C2orf88Q9BSF0 95 aa13.18□□□□□ -0.3
TNFRSF10B-204ENST00000519028 Q8N1X5 172 aa13.17□□□□□ -0.3
TNFRSF10B-204ENST00000519028 SCGB3A1Q96QR1 104 aa13.17□□□□□ -0.3
TNFRSF10B-204ENST00000519028 MALP21145 153 aa13.16□□□□□ -0.3
TNFRSF10B-204ENST00000519028 UBE2D1P51668 147 aa13.16□□□□□ -0.3
TNFRSF10B-204ENST00000519028 LINC00242Q5T6M2 205 aa13.16□□□□□ -0.3
TNFRSF10B-204ENST00000519028 LINC00526Q96FQ7 95 aa13.16□□□□□ -0.3
TNFRSF10B-204ENST00000519028 KRTAP4-5Q9BYR2 181 aa13.16□□□□□ -0.3
TNFRSF10B-204ENST00000519028 APOMO95445 188 aa13.15□□□□□ -0.3
TNFRSF10B-204ENST00000519028 COLCA2A8K830 154 aa13.14□□□□□ -0.31
TNFRSF10B-204ENST00000519028 COX6A2Q02221 97 aa13.14□□□□□ -0.31
TNFRSF10B-204ENST00000519028 FAM19A3Q7Z5A8 133 aa13.14□□□□□ -0.31
TNFRSF10B-204ENST00000519028 ZNF561-AS1K7EIQ3 104 aa13.13□□□□□ -0.31
TNFRSF10B-204ENST00000519028 FAT1Q14517 4588 aa13.12□□□□□ -0.31
TNFRSF10B-204ENST00000519028 IGHV3-64A0A075B6Q5 118 aa13.12□□□□□ -0.31
TNFRSF10B-204ENST00000519028 SMR3BP02814 79 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF10B-204ENST00000519028 SEC11AP67812 179 aa13.12□□□□□ -0.31
TNFRSF10B-204ENST00000519028 CHAC1Q9BUX1 264 aa13.12□□□□□ -0.31
TNFRSF10B-204ENST00000519028 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
TNFRSF10B-204ENST00000519028 A0A087WZ39 114 aa13.11□□□□□ -0.31
TNFRSF10B-204ENST00000519028 A0A096LNJ9 63 aa13.11□□□□□ -0.31
TNFRSF10B-204ENST00000519028 TRGC2P03986 189 aa13.11□□□□□ -0.31
TNFRSF10B-204ENST00000519028 SCXQ7RTU7 201 aa13.11□□□□□ -0.31
TNFRSF10B-204ENST00000519028 LINC01561Q8N1V8 128 aa13.11□□□□□ -0.31
TNFRSF10B-204ENST00000519028 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
TNFRSF10B-204ENST00000519028 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
TNFRSF10B-204ENST00000519028 F8WDY8 70 aa13.09□□□□□ -0.31
TNFRSF10B-204ENST00000519028 PANO1I0J062 215 aa13.09□□□□□ -0.31
TNFRSF10B-204ENST00000519028 CIRBP-AS1Q8TBR5 109 aa13.09□□□□□ -0.31
TNFRSF10B-204ENST00000519028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF10B-204ENST00000519028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF10B-204ENST00000519028 HBDP02042 147 aa13.08□□□□□ -0.32
TNFRSF10B-204ENST00000519028 SYCNQ0VAF6 134 aa13.08□□□□□ -0.32
TNFRSF10B-204ENST00000519028 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
TNFRSF10B-204ENST00000519028 HERVK_113P63121 156 aa13.07□□□□□ -0.32
TNFRSF10B-204ENST00000519028 CST9LQ9H4G1 147 aa13.07□□□□□ -0.32
TNFRSF10B-204ENST00000519028 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 CIRBPQ14011 172 aaKnown RBP13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 PMVKQ15126 192 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 PMCHL1Q16048 86 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 ORAOV1Q8WV07 137 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 CARD19Q96LW7 228 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 PKIGQ9Y2B9 76 aa13.06□□□□□ -0.32
TNFRSF10B-204ENST00000519028 EPM2AB3EWF7 344 aa13.05□□□□□ -0.32
TNFRSF10B-204ENST00000519028 SCO1O75880 301 aa13.05□□□□□ -0.32
TNFRSF10B-204ENST00000519028 ATP5LO75964 103 aa13.05□□□□□ -0.32
TNFRSF10B-204ENST00000519028 Q6ZRU5 148 aa13.05□□□□□ -0.32
TNFRSF10B-204ENST00000519028 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
TNFRSF10B-204ENST00000519028 CAMK2N2Q96S95 79 aa13.04□□□□□ -0.32
TNFRSF10B-204ENST00000519028 GEMIN7Q9H840 131 aaKnown RBP13.04□□□□□ -0.32
TNFRSF10B-204ENST00000519028 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
TNFRSF10B-204ENST00000519028 CHTF8P0CG12 524 aa13.03□□□□□ -0.32
TNFRSF10B-204ENST00000519028 KIAA0087Q14695 138 aa13.03□□□□□ -0.32
TNFRSF10B-204ENST00000519028 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
TNFRSF10B-204ENST00000519028 RNF151Q2KHN1 245 aa13.02□□□□□ -0.33
TNFRSF10B-204ENST00000519028 Q5VSD8 79 aa13.02□□□□□ -0.33
TNFRSF10B-204ENST00000519028 CDKN2A-AS1Q9UH64 79 aa13.02□□□□□ -0.33
TNFRSF10B-204ENST00000519028 SPACA4Q8TDM5 124 aa13.01□□□□□ -0.33
TNFRSF10B-204ENST00000519028 ABCA13Q86UQ4 5058 aa13.01□□□□□ -0.33
TNFRSF10B-204ENST00000519028 FAM229AH3BQW9 127 aa13□□□□□ -0.33
TNFRSF10B-204ENST00000519028 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
TNFRSF10B-204ENST00000519028 A0A096LNI7 61 aa12.99□□□□□ -0.33
TNFRSF10B-204ENST00000519028 HSBP1O75506 76 aa12.99□□□□□ -0.33
TNFRSF10B-204ENST00000519028 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
TNFRSF10B-204ENST00000519028 MRPL35Q9NZE8 188 aaKnown RBP12.99□□□□□ -0.33
TNFRSF10B-204ENST00000519028 PCLOQ9Y6V0 5065 aa12.99□□□□□ -0.33
TNFRSF10B-204ENST00000519028 NDUFA1O15239 70 aa12.98□□□□□ -0.33
TNFRSF10B-204ENST00000519028 S100A1P23297 94 aa12.98□□□□□ -0.33
TNFRSF10B-204ENST00000519028 C10orf25Q5T742 122 aa12.98□□□□□ -0.33
TNFRSF10B-204ENST00000519028 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
TNFRSF10B-204ENST00000519028 LINC00474Q9P2X8 69 aa12.98□□□□□ -0.33
TNFRSF10B-204ENST00000519028 A0A087WYN8 130 aa12.97□□□□□ -0.33
TNFRSF10B-204ENST00000519028 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
TNFRSF10B-204ENST00000519028 UNQ6190/PRO20217Q6UXQ8 127 aa12.97□□□□□ -0.33
TNFRSF10B-204ENST00000519028 LOC107984640A0A0U1RRK4 108 aa12.96□□□□□ -0.33
TNFRSF10B-204ENST00000519028 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
TNFRSF10B-204ENST00000519028 LINC00469Q8N7U9 141 aa12.96□□□□□ -0.33
TNFRSF10B-204ENST00000519028 PACRGQ96M98 296 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF10B-204ENST00000519028 VPS13BQ7Z7G8 4022 aa12.96□□□□□ -0.34
TNFRSF10B-204ENST00000519028 IGLC3P0DOY3 106 aa12.95□□□□□ -0.34
TNFRSF10B-204ENST00000519028 NDUFA6P56556 154 aa12.95□□□□□ -0.34
TNFRSF10B-204ENST00000519028 LINC00310P59036 64 aa12.95□□□□□ -0.34
TNFRSF10B-204ENST00000519028 FAM19A2Q8N3H0 131 aa12.95□□□□□ -0.34
TNFRSF10B-204ENST00000519028 SERF1AO75920 110 aa12.94□□□□□ -0.34
TNFRSF10B-204ENST00000519028 PRSS2P07478 247 aa12.94□□□□□ -0.34
TNFRSF10B-204ENST00000519028 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
TNFRSF10B-204ENST00000519028 Q8IZM0 81 aa12.94□□□□□ -0.34
TNFRSF10B-204ENST00000519028 IFI27L1Q96BM0 104 aa12.94□□□□□ -0.34
TNFRSF10B-204ENST00000519028 PLAC8Q9NZF1 115 aa12.94□□□□□ -0.34
TNFRSF10B-204ENST00000519028 PTTG1IPP53801 180 aa12.93□□□□□ -0.34
TNFRSF10B-204ENST00000519028 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms