RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CEBPZOSA8MTT3 80 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 CD3DP04234 171 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 NMUP48645 174 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
PABPC1-207ENST00000518716 CENPWQ5EE01 88 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 Q8N814 137 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 NRACQ8N912 160 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 VGLL1Q99990 258 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 MTFP1Q9UDX5 166 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 TRAV8-6A0A0B4J262 113 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 IGHV3OR16-9A0A0B4J2B5 98 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 IGHV1-58A0A0C4DH39 117 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 A0A1W2PPM0 123 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 PRAC2D3DTV9 90 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 H3BRN7 92 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 UBE2L6O14933 153 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 SPINK4O60575 86 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 MT-ATP8P03928 68 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 SLC25A5P05141 298 aaKnown RBP3.96□□□□□ -1.78
PABPC1-207ENST00000518716 GATA2P23769 480 aaPredicted RBP3.96□□□□□ -1.78
PABPC1-207ENST00000518716 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
PABPC1-207ENST00000518716 Q6ZVQ6 151 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 WFDC10BQ8IUB3 73 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 FAM19A4Q96LR4 140 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 PYGO2Q9BRQ0 406 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 AGPAT4-IT1Q9H0P7 198 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 SLC25A22Q9H936 323 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 ICOSQ9Y6W8 199 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 LY96Q9Y6Y9 160 aa3.96□□□□□ -1.78
PABPC1-207ENST00000518716 TRBV20-1A0A075B6N2 111 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 A0A087WZ39 114 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 FAM236AA0A1B0GUQ0 79 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 FAM236BA0A1B0GV22 79 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 A0A1B0GXF2 115 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 hDV102S1A0JD36 115 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 CRYM-AS1A6NIL9 109 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 SNURFLB1AK76 121 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 UMAD1C9J7I0 102 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 CST7O76096 145 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 PRB4P10163 310 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-207ENST00000518716 TAS2R45P59539 299 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 PPDPFLQ8WWR9 84 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 ODF3Q96PU9 254 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 NAA38Q9BRA0 125 aaKnown RBP3.95□□□□□ -1.78
PABPC1-207ENST00000518716 OTORQ9NRC9 128 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
PABPC1-207ENST00000518716 IGLV5-39A0A0G2JS06 123 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 IBA57-AS1B1ANH7 110 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 C8orf87E5RJ46 101 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 ZNF253O75346 499 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 WFDC2Q14508 124 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 LINC00305Q7Z4B0 112 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 LYZL2Q7Z4W2 148 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 CMTM2Q8TAZ6 248 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 C18orf32Q8TCD1 76 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 TVP23CQ96ET8 276 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 CARD19Q96LW7 228 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 SLC39A9Q9NUM3 307 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 PRO0255Q9UI72 69 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 HHLA3Q9XRX5 114 aa3.94□□□□□ -1.78
PABPC1-207ENST00000518716 TRGV2A0A075B6R0 118 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 TRAV9-1A0A075B6T8 112 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 FXYD6-FXYD2A0A087WZ82 144 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 TRGV1A0A0A0MS02 117 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 TRAV12-3A0A0B4J271 114 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 ZNF727A8MUV8 499 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 K7EQD1 137 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 COX7CP15954 63 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
PABPC1-207ENST00000518716 LSM3P62310 102 aaKnown RBP3.93□□□□□ -1.78
PABPC1-207ENST00000518716 LINC01556Q5JQF7 62 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 CHAC1Q9BUX1 264 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 RBM12B-AS1Q9P1G2 102 aa3.93□□□□□ -1.78
PABPC1-207ENST00000518716 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 KLLNB2CW77 178 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 H0Y9J4 135 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
PABPC1-207ENST00000518716 NPC2P61916 151 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 ERCC8Q13216 396 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 CYP2G1PQ6ZSU1 146 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 ATP5L2Q7Z4Y8 100 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 BPIFA4PQ86YQ2 179 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 CIRBP-AS1Q8TBR5 109 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 MGST2Q99735 147 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 MUC2Q02817 5179 aa3.92□□□□□ -1.78
PABPC1-207ENST00000518716 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 IGHV3-38A0A0C4DH36 116 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 H3BT86 120 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 SYS1-DBNDD2H3BUS1 97 aa3.91□□□□□ -1.78
PABPC1-207ENST00000518716 SSBP1Q04837 148 aaKnown RBP3.91□□□□□ -1.78
PABPC1-207ENST00000518716 MPV17L2Q567V2 206 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 365 ms