RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 WFDC2Q14508 124 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 PMVKQ15126 192 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 LINC00242Q5T6M2 205 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 FAM19A3Q7Z5A8 133 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 RYR1P21817 5038 aa11.7□□□□□ -0.54
TRAM1-202ENST00000518678 USP17L23D6RBM5 183 aa11.68□□□□□ -0.54
TRAM1-202ENST00000518678 EREGO14944 169 aa11.68□□□□□ -0.54
TRAM1-202ENST00000518678 LECT2O14960 151 aa11.68□□□□□ -0.54
TRAM1-202ENST00000518678 IGHV3OR16-9A0A0B4J2B5 98 aa11.67□□□□□ -0.54
TRAM1-202ENST00000518678 PRSS1P07477 247 aa11.67□□□□□ -0.54
TRAM1-202ENST00000518678 SEC11AP67812 179 aa11.67□□□□□ -0.54
TRAM1-202ENST00000518678 COX6A2Q02221 97 aa11.67□□□□□ -0.54
TRAM1-202ENST00000518678 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
TRAM1-202ENST00000518678 LRP1BQ9NZR2 4599 aa11.67□□□□□ -0.54
TRAM1-202ENST00000518678 COX7A2LO14548 114 aa11.66□□□□□ -0.54
TRAM1-202ENST00000518678 FABP4P15090 132 aa11.66□□□□□ -0.54
TRAM1-202ENST00000518678 Q8N814 137 aa11.66□□□□□ -0.54
TRAM1-202ENST00000518678 PACRGQ96M98 296 aaPredicted RBP11.66□□□□□ -0.54
TRAM1-202ENST00000518678 DNAH5Q8TE73 4624 aa11.65□□□□□ -0.54
TRAM1-202ENST00000518678 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
TRAM1-202ENST00000518678 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
TRAM1-202ENST00000518678 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
TRAM1-202ENST00000518678 TRAV12-1A0A0B4J245 112 aa11.64□□□□□ -0.55
TRAM1-202ENST00000518678 TINCRA0A1B0GVN0 87 aa11.64□□□□□ -0.55
TRAM1-202ENST00000518678 HERVK_113P63121 156 aa11.64□□□□□ -0.55
TRAM1-202ENST00000518678 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
TRAM1-202ENST00000518678 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
TRAM1-202ENST00000518678 ABCA13Q86UQ4 5058 aa11.64□□□□□ -0.55
TRAM1-202ENST00000518678 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
TRAM1-202ENST00000518678 GEMIN7Q9H840 131 aaKnown RBP11.63□□□□□ -0.55
TRAM1-202ENST00000518678 HSPG2P98160 4391 aa11.63□□□□□ -0.55
TRAM1-202ENST00000518678 A0A087WZ39 114 aa11.62□□□□□ -0.55
TRAM1-202ENST00000518678 S100A6P06703 90 aa11.62□□□□□ -0.55
TRAM1-202ENST00000518678 IGLC3P0DOY3 106 aa11.62□□□□□ -0.55
TRAM1-202ENST00000518678 MALP21145 153 aa11.62□□□□□ -0.55
TRAM1-202ENST00000518678 IGLV4-69A0A075B6H9 119 aa11.61□□□□□ -0.55
TRAM1-202ENST00000518678 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
TRAM1-202ENST00000518678 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
TRAM1-202ENST00000518678 CHTOPQ9Y3Y2 248 aaKnown RBP11.61□□□□□ -0.55
TRAM1-202ENST00000518678 APOBP04114 4563 aaKnown RBP11.6□□□□□ -0.55
TRAM1-202ENST00000518678 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
TRAM1-202ENST00000518678 GVQW2A0A096LPI5 108 aaPredicted RBP11.6□□□□□ -0.55
TRAM1-202ENST00000518678 APOMO95445 188 aa11.6□□□□□ -0.55
TRAM1-202ENST00000518678 NTN5Q8WTR8 489 aaPredicted RBP11.6□□□□□ -0.55
TRAM1-202ENST00000518678 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
TRAM1-202ENST00000518678 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
TRAM1-202ENST00000518678 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 HIGD2BQ4VC39 106 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 HIST3H2BBQ8N257 126 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 LINC00469Q8N7U9 141 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
TRAM1-202ENST00000518678 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.58□□□□□ -0.56
TRAM1-202ENST00000518678 IGHV3-64A0A075B6Q5 118 aa11.58□□□□□ -0.56
TRAM1-202ENST00000518678 F8VRH5 84 aa11.58□□□□□ -0.56
TRAM1-202ENST00000518678 H0Y8G0 127 aa11.58□□□□□ -0.56
TRAM1-202ENST00000518678 ODF1Q14990 250 aa11.58□□□□□ -0.56
TRAM1-202ENST00000518678 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
TRAM1-202ENST00000518678 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
TRAM1-202ENST00000518678 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
TRAM1-202ENST00000518678 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
TRAM1-202ENST00000518678 S100A2P29034 98 aa11.56□□□□□ -0.56
TRAM1-202ENST00000518678 SNRPEP62304 92 aaKnown RBP11.56□□□□□ -0.56
TRAM1-202ENST00000518678 ORAOV1Q8WV07 137 aa11.56□□□□□ -0.56
TRAM1-202ENST00000518678 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
TRAM1-202ENST00000518678 SYS1-DBNDD2H3BUS1 97 aa11.55□□□□□ -0.56
TRAM1-202ENST00000518678 ZNF561-AS1K7EIQ3 104 aa11.55□□□□□ -0.56
TRAM1-202ENST00000518678 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
TRAM1-202ENST00000518678 FUSP35637 526 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAM1-202ENST00000518678 IGLV5-52A0A0A0MRZ9 124 aa11.54□□□□□ -0.56
TRAM1-202ENST00000518678 H3BRM9 83 aa11.54□□□□□ -0.56
TRAM1-202ENST00000518678 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
TRAM1-202ENST00000518678 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
TRAM1-202ENST00000518678 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
TRAM1-202ENST00000518678 HIST1H2BLQ99880 126 aa11.54□□□□□ -0.56
TRAM1-202ENST00000518678 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
TRAM1-202ENST00000518678 SLPIP03973 132 aa11.53□□□□□ -0.56
TRAM1-202ENST00000518678 PET117Q6UWS5 81 aa11.53□□□□□ -0.56
TRAM1-202ENST00000518678 LINC00526Q96FQ7 95 aa11.53□□□□□ -0.56
TRAM1-202ENST00000518678 SPINK8P0C7L1 97 aa11.52□□□□□ -0.57
TRAM1-202ENST00000518678 TMEM170BQ5T4T1 132 aa11.52□□□□□ -0.57
TRAM1-202ENST00000518678 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
TRAM1-202ENST00000518678 DPM2O94777 84 aa11.51□□□□□ -0.57
TRAM1-202ENST00000518678 PLNP26678 52 aa11.51□□□□□ -0.57
TRAM1-202ENST00000518678 KRTDAPP60985 99 aa11.51□□□□□ -0.57
TRAM1-202ENST00000518678 KIAA0087Q14695 138 aa11.51□□□□□ -0.57
TRAM1-202ENST00000518678 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
TRAM1-202ENST00000518678 KRTAP4-5Q9BYR2 181 aa11.51□□□□□ -0.57
TRAM1-202ENST00000518678 LINC01545Q5VT33 79 aa11.5□□□□□ -0.57
TRAM1-202ENST00000518678 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
TRAM1-202ENST00000518678 C16orf90A8MZG2 172 aa11.49□□□□□ -0.57
TRAM1-202ENST00000518678 F8WDY8 70 aa11.49□□□□□ -0.57
TRAM1-202ENST00000518678 Q8IZM0 81 aa11.49□□□□□ -0.57
TRAM1-202ENST00000518678 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
TRAM1-202ENST00000518678 IGLV5-39A0A0G2JS06 123 aa11.48□□□□□ -0.57
TRAM1-202ENST00000518678 IGKCP01834 107 aa11.48□□□□□ -0.57
TRAM1-202ENST00000518678 PRSS2P07478 247 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms