RNA–Protein interactions for RNA: ENST00000518161.1

TMEM30A-204, Transcript of transmembrane protein 30A, humanhuman

TSL 4

Gene TMEM30A, Length 445 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-204ENST00000518161 APOC3P02656 99 aa-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 PPP3R2Q96LZ3 170 aa-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 LINC00474Q9P2X8 69 aa-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 PKHD1P08F94 4074 aa-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 SONP18583 2426 aaKnown RBP-0.66□□□□□ -2.52
TMEM30A-204ENST00000518161 ROBO1Q9Y6N7 1651 aa-0.67□□□□□ -2.52
TMEM30A-204ENST00000518161 SPRR1BP22528 89 aa-0.67□□□□□ -2.52
TMEM30A-204ENST00000518161 Q56UQ5 140 aa-0.67□□□□□ -2.52
TMEM30A-204ENST00000518161 TGP01266 2768 aa-0.67□□□□□ -2.52
TMEM30A-204ENST00000518161 CHD8Q9HCK8 2581 aa-0.67□□□□□ -2.52
TMEM30A-204ENST00000518161 SVEP1Q4LDE5 3571 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 NBPF19A0A087WUL8 3843 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 TPPP2P59282 170 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 SPANXDQ9BXN6 97 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 FXYD6Q9H0Q3 95 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 TCHHQ07283 1943 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 SETD2Q9BYW2 2564 aaPredicted RBP-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 ABCA13Q86UQ4 5058 aa-0.68□□□□□ -2.52
TMEM30A-204ENST00000518161 DNHD1Q96M86 4753 aa-0.69□□□□□ -2.52
TMEM30A-204ENST00000518161 TSC22D3Q99576 134 aa-0.69□□□□□ -2.52
TMEM30A-204ENST00000518161 MXRA5Q9NR99 2828 aa-0.69□□□□□ -2.52
TMEM30A-204ENST00000518161 KDM5AP29375 1690 aaKnown RBP-0.69□□□□□ -2.52
TMEM30A-204ENST00000518161 LOC730098B7Z3J9 87 aa-0.7□□□□□ -2.52
TMEM30A-204ENST00000518161 SFT2D2O95562 160 aa-0.7□□□□□ -2.52
TMEM30A-204ENST00000518161 COX6B1P14854 86 aa-0.7□□□□□ -2.52
TMEM30A-204ENST00000518161 WDR7Q9Y4E6 1490 aa-0.7□□□□□ -2.52
TMEM30A-204ENST00000518161 ARHGEF12Q9NZN5 1544 aa-0.7□□□□□ -2.52
TMEM30A-204ENST00000518161 PKHD1L1Q86WI1 4243 aa-0.71□□□□□ -2.52
TMEM30A-204ENST00000518161 CHKB-CPT1BH3BT56 60 aa-0.71□□□□□ -2.52
TMEM30A-204ENST00000518161 APOC2P02655 101 aa-0.71□□□□□ -2.52
TMEM30A-204ENST00000518161 HECTD1Q9ULT8 2610 aa-0.71□□□□□ -2.52
TMEM30A-204ENST00000518161 DNAH6Q9C0G6 4158 aa-0.71□□□□□ -2.52
TMEM30A-204ENST00000518161 OOSP1A8MZH6 123 aa-0.72□□□□□ -2.52
TMEM30A-204ENST00000518161 MRPL54Q6P161 138 aaKnown RBP-0.72□□□□□ -2.52
TMEM30A-204ENST00000518161 COMMD6Q7Z4G1 85 aa-0.72□□□□□ -2.52
TMEM30A-204ENST00000518161 C5orf38Q86SI9 138 aa-0.72□□□□□ -2.52
TMEM30A-204ENST00000518161 DNAH3Q8TD57 4116 aa-0.72□□□□□ -2.52
TMEM30A-204ENST00000518161 URB1O60287 2271 aaKnown RBP-0.72□□□□□ -2.53
TMEM30A-204ENST00000518161 NSD3Q9BZ95 1437 aa-0.72□□□□□ -2.53
TMEM30A-204ENST00000518161 ARHGEF5Q12774 1597 aa-0.73□□□□□ -2.53
TMEM30A-204ENST00000518161 SHROOM2Q13796 1616 aa-0.73□□□□□ -2.53
TMEM30A-204ENST00000518161 IFNGP01579 166 aa-0.73□□□□□ -2.53
TMEM30A-204ENST00000518161 BTG2P78543 158 aa-0.73□□□□□ -2.53
TMEM30A-204ENST00000518161 C8orf59Q8N0T1 100 aaPredicted RBP-0.73□□□□□ -2.53
TMEM30A-204ENST00000518161 POLA1P09884 1462 aaPredicted RBP-0.73□□□□□ -2.53
TMEM30A-204ENST00000518161 EPG5Q9HCE0 2579 aa-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 TEP1Q99973 2627 aaKnown RBP-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 QRICH2Q9H0J4 1663 aa-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 K7EP13 123 aa-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 SSSCA1O60232 199 aa-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 AKAIN1P0CW23 69 aa-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 USP9YO00507 2555 aaPredicted RBP-0.74□□□□□ -2.53
TMEM30A-204ENST00000518161 RAPGEF6Q8TEU7 1601 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 MYOM1P52179 1685 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 ITPR3Q14573 2671 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 LOC285095A0A1B0GVY8 99 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 IGLC1P0CG04 106 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 FGF7P21781 194 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 MYOZ3Q8TDC0 251 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 NAIPQ13075 1403 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 SHANK2Q9UPX8 1470 aa-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 PLECQ15149 4684 aaKnown RBP-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 TNRC18O15417 2968 aaPredicted RBP-0.75□□□□□ -2.53
TMEM30A-204ENST00000518161 MUC17Q685J3 4493 aa-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 UBA52P62987 128 aaKnown RBP-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 S100A12P80511 92 aa-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 KLK9Q2XQG4 91 aa-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 KRTAP6-2Q3LI66 62 aa-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 C10orf113Q5VZT2 155 aa-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 NXT2Q9NPJ8 142 aaKnown RBP-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 PCNX1Q96RV3 2341 aa-0.76□□□□□ -2.53
TMEM30A-204ENST00000518161 ZFHX3Q15911 3703 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 MGPP08493 103 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 SPRR2EP22531 72 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 C9orf153Q5TBE3 101 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 FAM223AQ8IWN6 122 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 DEFB123Q8N688 67 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 FDCSPQ8NFU4 85 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 FAIMQ9NVQ4 179 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 ARL2-SNX15V9GYD0 113 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 DNAJC13O75165 2243 aa-0.77□□□□□ -2.53
TMEM30A-204ENST00000518161 CUL7Q14999 1698 aa-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 ROCK2O75116 1388 aaKnown RBP-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 SNAPC5O75971 98 aa-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 SPRR2AP35326 72 aa-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 SFTA2Q6UW10 78 aa-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 TMEM263Q8WUH6 116 aaKnown RBP-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 FASNP49327 2511 aaKnown RBP-0.78□□□□□ -2.53
TMEM30A-204ENST00000518161 NIPBLQ6KC79 2804 aaeCLIP-0.79□□□□□ -2.54
TMEM30A-204ENST00000518161 KTN1Q86UP2 1357 aaKnown RBP-0.79□□□□□ -2.54
TMEM30A-204ENST00000518161 PP6455Q8WZ26 134 aa-0.79□□□□□ -2.54
TMEM30A-204ENST00000518161 CDC42SE2Q9NRR3 84 aa-0.79□□□□□ -2.54
TMEM30A-204ENST00000518161 UQCR10Q9UDW1 63 aa-0.79□□□□□ -2.54
TMEM30A-204ENST00000518161 SCN7AQ01118 1682 aa-0.79□□□□□ -2.54
TMEM30A-204ENST00000518161 GAPVD1Q14C86 1478 aa-0.8□□□□□ -2.54
TMEM30A-204ENST00000518161 DNAH2Q9P225 4427 aa-0.8□□□□□ -2.54
TMEM30A-204ENST00000518161 TET3O43151 1660 aa-0.8□□□□□ -2.54
TMEM30A-204ENST00000518161 LINC00959A0A1B0GUT2 108 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms