RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 LITAFQ99732 161 aa18.45■□□□□ 0.54
COL13A1-210ENST00000517713 TRAV26-1A0A087WT03 109 aa18.44■□□□□ 0.54
COL13A1-210ENST00000517713 IGKV3OR2-268A0A0C4DH90 116 aa18.44■□□□□ 0.54
COL13A1-210ENST00000517713 NDUFA1O15239 70 aa18.44■□□□□ 0.54
COL13A1-210ENST00000517713 TMEM262E9PQX1 116 aa18.44■□□□□ 0.54
COL13A1-210ENST00000517713 APOMO95445 188 aa18.44■□□□□ 0.54
COL13A1-210ENST00000517713 MUSTN1Q8IVN3 82 aa18.44■□□□□ 0.54
COL13A1-210ENST00000517713 BAHCC1Q9P281 2608 aa18.43■□□□□ 0.54
COL13A1-210ENST00000517713 HTN3P15516 51 aa18.42■□□□□ 0.54
COL13A1-210ENST00000517713 A0A1B0GUV1 79 aa18.42■□□□□ 0.54
COL13A1-210ENST00000517713 TEX48A0A1B0GUV7 120 aa18.42■□□□□ 0.54
COL13A1-210ENST00000517713 RETNQ9HD89 108 aa18.42■□□□□ 0.54
COL13A1-210ENST00000517713 CFC1BP0CG36 223 aa18.41■□□□□ 0.54
COL13A1-210ENST00000517713 CFC1P0CG37 223 aa18.41■□□□□ 0.54
COL13A1-210ENST00000517713 RPL24P83731 157 aaKnown RBP18.41■□□□□ 0.54
COL13A1-210ENST00000517713 PGPEP1Q9NXJ5 209 aa18.41■□□□□ 0.54
COL13A1-210ENST00000517713 G3V4G9 280 aa18.4■□□□□ 0.54
COL13A1-210ENST00000517713 SPANXDQ9BXN6 97 aa18.4■□□□□ 0.54
COL13A1-210ENST00000517713 SPANXCQ9NY87 97 aa18.4■□□□□ 0.54
COL13A1-210ENST00000517713 A4D1N5 150 aa18.4■□□□□ 0.54
COL13A1-210ENST00000517713 RBX1P62877 108 aa18.4■□□□□ 0.54
COL13A1-210ENST00000517713 ADAMTSL4-AS1Q5T5F5 129 aa18.4■□□□□ 0.54
COL13A1-210ENST00000517713 TIMM17BO60830 172 aa18.39■□□□□ 0.53
COL13A1-210ENST00000517713 Q9H8V8 135 aa18.38■□□□□ 0.53
COL13A1-210ENST00000517713 MRPL23Q16540 153 aaKnown RBP18.37■□□□□ 0.53
COL13A1-210ENST00000517713 PRSS2P07478 247 aa18.37■□□□□ 0.53
COL13A1-210ENST00000517713 LINC00959A0A1B0GUT2 108 aa18.36■□□□□ 0.53
COL13A1-210ENST00000517713 MIAQ16674 131 aa18.36■□□□□ 0.53
COL13A1-210ENST00000517713 CMYA5Q8N3K9 4069 aa18.36■□□□□ 0.53
COL13A1-210ENST00000517713 TSPAN13O95857 204 aa18.35■□□□□ 0.53
COL13A1-210ENST00000517713 STAB1Q9NY15 2570 aa18.35■□□□□ 0.53
COL13A1-210ENST00000517713 IGHV3OR16-9A0A0B4J2B5 98 aa18.34■□□□□ 0.53
COL13A1-210ENST00000517713 ICOSQ9Y6W8 199 aa18.34■□□□□ 0.53
COL13A1-210ENST00000517713 CIRBPQ14011 172 aaKnown RBP18.33■□□□□ 0.53
COL13A1-210ENST00000517713 PRO1854Q9UHT4 67 aa18.33■□□□□ 0.53
COL13A1-210ENST00000517713 SH2D6Q7Z4S9 175 aa18.33■□□□□ 0.52
COL13A1-210ENST00000517713 ZNF625Q96I27 306 aaPredicted RBP18.33■□□□□ 0.52
COL13A1-210ENST00000517713 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-210ENST00000517713 A0A0B4J2C4 111 aa18.31■□□□□ 0.52
COL13A1-210ENST00000517713 EIF4EBP3O60516 100 aaPredicted RBP18.3■□□□□ 0.52
COL13A1-210ENST00000517713 SS18Q15532 418 aa18.3■□□□□ 0.52
COL13A1-210ENST00000517713 A0A087WZ39 114 aa18.3■□□□□ 0.52
COL13A1-210ENST00000517713 HERV-K104P63124 156 aa18.29■□□□□ 0.52
COL13A1-210ENST00000517713 COX7B2Q8TF08 81 aa18.29■□□□□ 0.52
COL13A1-210ENST00000517713 IFITM1P13164 125 aa18.28■□□□□ 0.52
COL13A1-210ENST00000517713 NPC2P61916 151 aa18.28■□□□□ 0.52
COL13A1-210ENST00000517713 C11orf68Q9H3H3 251 aaKnown RBP18.28■□□□□ 0.52
COL13A1-210ENST00000517713 PKD1L1Q8TDX9 2849 aa18.27■□□□□ 0.52
COL13A1-210ENST00000517713 CLPSL2Q6UWE3 100 aa18.27■□□□□ 0.52
COL13A1-210ENST00000517713 C5orf38Q86SI9 138 aa18.27■□□□□ 0.52
COL13A1-210ENST00000517713 DAND5Q8N907 189 aa18.27■□□□□ 0.52
COL13A1-210ENST00000517713 LELP1Q5T871 98 aa18.27■□□□□ 0.51
COL13A1-210ENST00000517713 XCL1P47992 114 aa18.25■□□□□ 0.51
COL13A1-210ENST00000517713 LINC00269Q8N2A0 174 aa18.25■□□□□ 0.51
COL13A1-210ENST00000517713 TOMM7Q9P0U1 55 aa18.25■□□□□ 0.51
COL13A1-210ENST00000517713 MEIG1Q5JSS6 88 aa18.25■□□□□ 0.51
COL13A1-210ENST00000517713 LOC107984156A0A0G2JMH3 177 aa18.24■□□□□ 0.51
COL13A1-210ENST00000517713 IGHV3-33P01772 117 aa18.24■□□□□ 0.51
COL13A1-210ENST00000517713 SFTA2Q6UW10 78 aa18.24■□□□□ 0.51
COL13A1-210ENST00000517713 ARL17AQ8IVW1 177 aa18.24■□□□□ 0.51
COL13A1-210ENST00000517713 ANGP03950 147 aaKnown RBP18.23■□□□□ 0.51
COL13A1-210ENST00000517713 Q8N3U1 123 aa18.23■□□□□ 0.51
COL13A1-210ENST00000517713 MAST4O15021 2626 aa18.23■□□□□ 0.51
COL13A1-210ENST00000517713 A0A0U1RRA0 63 aa18.23■□□□□ 0.51
COL13A1-210ENST00000517713 ERG28Q9UKR5 140 aa18.23■□□□□ 0.51
COL13A1-210ENST00000517713 H3BMG7 143 aa18.22■□□□□ 0.51
COL13A1-210ENST00000517713 Q6ZTC4 211 aa18.22■□□□□ 0.51
COL13A1-210ENST00000517713 A0A0J9YWU9 116 aa18.2■□□□□ 0.5
COL13A1-210ENST00000517713 H3BNG1 76 aa18.2■□□□□ 0.5
COL13A1-210ENST00000517713 LYRM7Q5U5X0 104 aa18.2■□□□□ 0.5
COL13A1-210ENST00000517713 LINC00308Q8TCZ7 52 aa18.2■□□□□ 0.5
COL13A1-210ENST00000517713 DNAH3Q8TD57 4116 aa18.2■□□□□ 0.5
COL13A1-210ENST00000517713 REG3AQ06141 175 aa18.2■□□□□ 0.5
COL13A1-210ENST00000517713 LYPD5Q6UWN5 251 aa18.19■□□□□ 0.5
COL13A1-210ENST00000517713 H7C2G1 150 aa18.18■□□□□ 0.5
COL13A1-210ENST00000517713 COPS9Q8WXC6 57 aa18.18■□□□□ 0.5
COL13A1-210ENST00000517713 KPRPQ5T749 579 aaPredicted RBP18.17■□□□□ 0.5
COL13A1-210ENST00000517713 LINC01561Q8N1V8 128 aa18.16■□□□□ 0.5
COL13A1-210ENST00000517713 CD164L2Q6UWJ8 174 aa18.16■□□□□ 0.5
COL13A1-210ENST00000517713 PRB2P02812 416 aaPredicted RBP18.15■□□□□ 0.5
COL13A1-210ENST00000517713 PSMB2P49721 201 aa18.15■□□□□ 0.5
COL13A1-210ENST00000517713 CHCHD10Q8WYQ3 142 aaPredicted RBP18.15■□□□□ 0.5
COL13A1-210ENST00000517713 ANK2Q01484 3957 aa18.15■□□□□ 0.5
COL13A1-210ENST00000517713 Q1RN00 199 aa18.15■□□□□ 0.5
COL13A1-210ENST00000517713 F8W1H4 67 aa18.14■□□□□ 0.49
COL13A1-210ENST00000517713 SCGB1C2P0DMR2 95 aa18.14■□□□□ 0.49
COL13A1-210ENST00000517713 SOSTDC1Q6X4U4 206 aa18.13■□□□□ 0.49
COL13A1-210ENST00000517713 IGLV10-54A0A075B6I4 117 aa18.13■□□□□ 0.49
COL13A1-210ENST00000517713 NANOS2P60321 138 aaKnown RBP18.13■□□□□ 0.49
COL13A1-210ENST00000517713 C6orf226Q5I0X4 101 aa18.13■□□□□ 0.49
COL13A1-210ENST00000517713 C11orf45Q8TAV5 145 aa18.13■□□□□ 0.49
COL13A1-210ENST00000517713 COL6A5A8TX70 2615 aa18.13■□□□□ 0.49
COL13A1-210ENST00000517713 OCIAD2Q56VL3 154 aa18.11■□□□□ 0.49
COL13A1-210ENST00000517713 TRBV20-1A0A075B6N2 111 aa18.11■□□□□ 0.49
COL13A1-210ENST00000517713 COX7A2LO14548 114 aa18.11■□□□□ 0.49
COL13A1-210ENST00000517713 TCL1BO95988 128 aa18.1■□□□□ 0.49
COL13A1-210ENST00000517713 Q8IZM0 81 aa18.1■□□□□ 0.49
COL13A1-210ENST00000517713 PPDPFQ9H3Y8 114 aa18.1■□□□□ 0.49
COL13A1-210ENST00000517713 PRO0461Q9UI25 63 aa18.09■□□□□ 0.49
COL13A1-210ENST00000517713 K7EIL1 84 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms