RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 POM121L12Q8N7R1 296 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 C15orf53Q8NAA6 179 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 Q8NBF4 154 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 TIMM17AQ99595 171 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 PRADC1Q9BSG0 188 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 RPP21Q9H633 154 aaKnown RBP1.88□□□□□ -2.11
SKP1-204ENST00000517691 JPT2Q9H910 190 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 PRO0255Q9UI72 69 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 LAMTOR2Q9Y2Q5 125 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 ICOSQ9Y6W8 199 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 LYSTQ99698 3801 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 A0A0J9YXY3 114 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 A0A1B0GUV1 79 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 A8MWL6 223 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 F2Z2F3 143 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 KRTAP4-16G5E9R7 235 aaPredicted RBP1.88□□□□□ -2.11
SKP1-204ENST00000517691 FABP9Q0Z7S8 132 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 OCIAD2Q56VL3 154 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 CLLU1Q5K131 121 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 RASL11AQ6T310 242 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 LYZL1Q6UWQ5 148 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 LINC01551Q86U37 167 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 C14orf178Q8N769 122 aaPredicted RBP1.88□□□□□ -2.11
SKP1-204ENST00000517691 SLC25A29Q8N8R3 303 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 FER1L6-AS1Q8NA97 138 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 OR10AG1Q8NH19 301 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 CHCHD5Q9BSY4 110 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 SMDT1Q9H4I9 107 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 NAT8Q9UHE5 227 aa1.88□□□□□ -2.11
SKP1-204ENST00000517691 IGLV8-61A0A075B6I0 122 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 A8MUN3 132 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 H3BNG1 76 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 M0R2N4 97 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 MGPP08493 103 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 CXCL1P09341 107 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 SCGB1C2P0DMR2 95 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 NTF3P20783 257 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 RHOHQ15669 191 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 ZNF56Q15929 161 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 ESRGQ1W209 222 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 ORMDL2Q53FV1 153 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 COA6Q5JTJ3 125 aaKnown RBP1.87□□□□□ -2.11
SKP1-204ENST00000517691 ZFP2Q6ZN57 461 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 SMIM29Q86T20 159 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 ZNF664Q8N3J9 261 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 GTSF1LQ9H1H1 148 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 SND1-IT1Q9HBX3 110 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 SCRT2Q9NQ03 307 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 LINC00588Q9Y4M8 146 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 LY96Q9Y6Y9 160 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 STARD9Q9P2P6 4700 aa1.87□□□□□ -2.11
SKP1-204ENST00000517691 LOC107984640A0A0U1RRK4 108 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 LST1O00453 97 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 APOMO95445 188 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 IGLC6P0CF74 106 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 EVI2AP22794 236 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 Q5XG85 94 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 LYPD5Q6UWN5 251 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 SH2D6Q7Z4S9 175 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 TSKUQ8WUA8 353 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 GTSF1Q8WW33 167 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 YPEL4Q96NS1 127 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 AP1S3Q96PC3 154 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 OSTCQ9NRP0 149 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 TMEM218A2RU14 115 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 HIGD1CA8MV81 97 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 MT-ND4LP03901 98 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 TRGC1P0CF51 173 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 FOXA3P55318 350 aaPredicted RBP1.86□□□□□ -2.11
SKP1-204ENST00000517691 HERVK_113P61574 105 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 RPL36AP83881 106 aaKnown RBP1.86□□□□□ -2.11
SKP1-204ENST00000517691 LYRM7Q5U5X0 104 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 C7orf33Q8WU49 177 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 ORAOV1Q8WV07 137 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 FAM104AQ969W3 186 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 NAA38Q9BRA0 125 aaKnown RBP1.86□□□□□ -2.11
SKP1-204ENST00000517691 TMEM70Q9BUB7 260 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 DPH3P1Q9H4G8 78 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 TP73-AS1Q9UF72 201 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 NAT8BQ9UHF3 227 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 V9GYV3 84 aa1.86□□□□□ -2.11
SKP1-204ENST00000517691 TRBV7-3A0A075B6L6 115 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 A0A1B0GUT8 65 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 C20orf202A1L168 122 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 IFITM10A6NMD0 228 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 COX7A2LO14548 114 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 C2orf66Q6UXQ4 117 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 Q8N9P0 234 aaPredicted RBP1.85□□□□□ -2.11
SKP1-204ENST00000517691 NUP35Q8NFH5 326 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 OR5A1Q8NGJ0 315 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 GFRA4Q9GZZ7 299 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 SPANXCQ9NY87 97 aa1.85□□□□□ -2.11
SKP1-204ENST00000517691 MRPS16Q9Y3D3 137 aaKnown RBP1.85□□□□□ -2.11
SKP1-204ENST00000517691 DYNC2H1Q8NCM8 4307 aaKnown RBP1.85□□□□□ -2.11
SKP1-204ENST00000517691 A0A087WWC5 75 aa1.84□□□□□ -2.11
SKP1-204ENST00000517691 TRBV10-1A0A0K0K1A3 114 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms