RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 ZNF706Q9Y5V0 76 aaPredicted RBP2.99□□□□□ -1.93
CPNE3-202ENST00000517391 TRAV12-2A0A075B6T6 113 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 IGSF23A1L1A6 192 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 MAP1LC3B2A6NCE7 125 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 FAM24AA6NFZ4 105 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 C17orf112F2Z3M2 114 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 TMEM250H0YL14 139 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 H3BNG1 76 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 M0QXV9 152 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 RTL8CO15255 209 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 IFNA1P01562 189 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 SLC25A5P05141 298 aaKnown RBP2.98□□□□□ -1.93
CPNE3-202ENST00000517391 DEFB130BP0DP73 79 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 DEFB130AP0DP74 79 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 HTN3P15516 51 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 CCL18P55774 89 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 FAM162BQ5T6X4 162 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 PRR9Q5T870 116 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 MIC13Q5XKP0 118 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 OR5C1Q8NGR4 320 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 PSMG3Q9BT73 122 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-202ENST00000517391 NPCDR1Q9BY65 106 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 MRPL32Q9BYC8 188 aaKnown RBP2.98□□□□□ -1.93
CPNE3-202ENST00000517391 PARD6GQ9BYG4 376 aaPredicted RBP2.98□□□□□ -1.93
CPNE3-202ENST00000517391 MAP1LC3BQ9GZQ8 125 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 NAT8Q9UHE5 227 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 MRPS16Q9Y3D3 137 aaKnown RBP2.98□□□□□ -1.93
CPNE3-202ENST00000517391 TIMM9Q9Y5J7 89 aa2.98□□□□□ -1.93
CPNE3-202ENST00000517391 TRBV19A0A075B6N1 114 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 ZNF727A8MUV8 499 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 F5H768 121 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 SLC17A3O00476 420 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 BCL2P10415 239 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 HTN1P15515 57 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 CSN1S1P47710 185 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 TAS2R45P59539 299 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 SERF2P84101 59 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 PLECQ15149 4684 aaKnown RBP2.97□□□□□ -1.93
CPNE3-202ENST00000517391 PDZD11Q5EBL8 140 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 IBA57Q5T440 356 aaKnown RBP2.97□□□□□ -1.93
CPNE3-202ENST00000517391 TMEM78Q5T7P6 136 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 LYPD1Q8N2G4 141 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 FAM213BQ8TBF2 198 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 VPS25Q9BRG1 176 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 LINC00467Q9BRT7 94 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 NOP10Q9NPE3 64 aaKnown RBP2.97□□□□□ -1.93
CPNE3-202ENST00000517391 ZNF586Q9NXT0 402 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 SPANXCQ9NY87 97 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 UQCR10Q9UDW1 63 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 FUT9Q9Y231 359 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 KMT2AQ03164 3969 aa2.97□□□□□ -1.93
CPNE3-202ENST00000517391 TRAV5A0A0B4J249 113 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 C7orf71A4D174 169 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 RBAKDNA6NC62 111 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 K7ERS5 55 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 CCL25O15444 150 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 IFNA5P01569 189 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 GPX1P07203 203 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 OR10J4P0C629 311 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 SMIM17P0DL12 118 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 ATP6V0CP27449 155 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 Q0VG73 95 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 C1orf134Q5TEV5 83 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 TXNDC17Q9BRA2 123 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 VAMP8Q9BV40 100 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 WDR61Q9GZS3 305 aaKnown RBP2.96□□□□□ -1.94
CPNE3-202ENST00000517391 LENEPQ9Y5L5 61 aa2.96□□□□□ -1.94
CPNE3-202ENST00000517391 TRGV2A0A075B6R0 118 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 TRAV12-3A0A0B4J271 114 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 NBDYA0A0U1RRE5 68 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 M0R2N4 97 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 M0R3E3 92 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 PYYP10082 97 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 TCL1AP56279 114 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 UBE2L3P68036 154 aaKnown RBP2.95□□□□□ -1.94
CPNE3-202ENST00000517391 CCL20P78556 96 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 MIR17HGQ75NE6 70 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 AMN1Q8IY45 258 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 ZNRF2Q8NHG8 242 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 FXYD5Q96DB9 178 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 FAM167A-AS1Q96KT0 104 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 UPK3BQ9BT76 320 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 AGPAT4-IT1Q9H0P7 198 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 MANBALQ9NQG1 85 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 ZNF492Q9P255 531 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 LAMTOR2Q9Y2Q5 125 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 TRAPPC1Q9Y5R8 145 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 BIRC6Q9NR09 4857 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
CPNE3-202ENST00000517391 EPPK1P58107 5090 aaKnown RBP2.94□□□□□ -1.94
CPNE3-202ENST00000517391 FRAS1Q86XX4 4008 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 PRM2P04554 102 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 IGLC3P0DOY3 106 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 RNASE4P34096 147 aaKnown RBP2.94□□□□□ -1.94
CPNE3-202ENST00000517391 MEF2BQ02080 365 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-202ENST00000517391 PMCHL1Q16048 86 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 OCIAD2Q56VL3 154 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 Q6ZTI0 123 aa2.94□□□□□ -1.94
CPNE3-202ENST00000517391 NIT1Q86X76 327 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms