RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 BTG2P78543 158 aa-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 ITGB3BPQ13352 177 aaPredicted RBP-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 ENHOQ6UWT2 76 aa-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 PLEKHB2Q96CS7 222 aa-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 DGCR14Q96DF8 476 aaKnown RBP-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 LPAR5Q9H1C0 372 aa-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 NOP10Q9NPE3 64 aaKnown RBP-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.9□□□□□ -2.55
SCARNA1-201ENST00000517138 TRBV19A0A075B6N1 114 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 SSSCA1O60232 199 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 ERP29P30040 261 aaKnown RBP-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 MRPS15P82914 257 aaKnown RBP-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 EDDM3AQ14507 147 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 SPINK13Q1W4C9 94 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 GLYATL3Q5SZD4 288 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 Q6ZRX8 168 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 LINC00299Q6ZSB3 139 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 OR4K15Q8NH41 348 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 SPRR4Q96PI1 79 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 SELENOSQ9BQE4 189 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 C19orf12Q9NSK7 152 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 PYCARDQ9ULZ3 195 aa-0.91□□□□□ -2.56
SCARNA1-201ENST00000517138 RPS17P08708 135 aaKnown RBP-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 HIST1H3AP68431 136 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 H3F3AP84243 136 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 MIR22HGQ0VDD5 57 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 IQCJQ1A5X6 159 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 AKIRIN2Q53H80 203 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 MINOS1Q5TGZ0 78 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 C10orf111Q8N326 155 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 LRRC18Q8N456 261 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 TEX37Q96LM6 180 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 SLC35B3Q9H1N7 401 aa-0.92□□□□□ -2.56
SCARNA1-201ENST00000517138 A0A096LPI6 279 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 hDV103S1A0JD37 113 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 FAM24AA6NFZ4 105 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 GGCTO75223 188 aaKnown RBP-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 ATG12O94817 140 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 SFTA3P0C7M3 94 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 NEFHP12036 1026 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 OR8J2Q8NGG1 315 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 LCN9Q8WX39 176 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 CCDC115Q96NT0 180 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 KAAG1Q9UBP8 84 aa-0.93□□□□□ -2.56
SCARNA1-201ENST00000517138 LOC107984640A0A0U1RRK4 108 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 PRORSD1PA6NEY8 169 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 RPS3P23396 243 aaKnown RBP eCLIP-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 LSM6P62312 80 aaKnown RBP-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 OR8B8Q15620 311 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 SSBP3-AS1Q7Z2R9 100 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 C5orf38Q86SI9 138 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 TAC4Q86UU9 113 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 OTUD6BQ8N6M0 293 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 PARVBQ9HBI1 364 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 PRO0255Q9UI72 69 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 NUBP2Q9Y5Y2 271 aa-0.94□□□□□ -2.56
SCARNA1-201ENST00000517138 H0YGG7 62 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 SULT1C4O75897 302 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 GYPBP06028 91 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 LCN6P62502 163 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 Q0VG73 95 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 TMEM97Q5BJF2 176 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 UNQ5815/PRO19632Q6UWF5 114 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 OR8J3Q8NGG0 315 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 OR2J1Q9GZK6 312 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 LINC00472Q9H8W2 130 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 POPDC3Q9HBV1 291 aa-0.95□□□□□ -2.56
SCARNA1-201ENST00000517138 GVQW2A0A096LPI5 108 aaPredicted RBP-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 RBAKDNA6NC62 111 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 XAF1Q6GPH4 301 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 C4orf33Q8N1A6 199 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 GNPDA2Q8TDQ7 276 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 ZHX1-C8orf76Q96EF9 292 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 GAFA1Q96PS6 74 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 MED11Q9P086 117 aa-0.96□□□□□ -2.56
SCARNA1-201ENST00000517138 NDUFA2O43678 99 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 MRPL33O75394 65 aaKnown RBP-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 SERPINA1P01009 418 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 PIPP12273 146 aaPredicted RBP-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 HLA-DRB4P13762 266 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 CDKN2CP42773 168 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 MYL6P60660 151 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 ZNF56Q15929 161 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 SLC25A26Q70HW3 274 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 OR9Q1Q8NGQ5 310 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 LINC00208Q96KT6 92 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 ZNF714Q96N38 554 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 NDUFAF1Q9Y375 327 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 HLA-DRB4X5D2U9 266 aa-0.97□□□□□ -2.56
SCARNA1-201ENST00000517138 PSMG4Q5JS54 123 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 C9orf153Q5TBE3 101 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 MORN4Q8NDC4 146 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 OR51A4Q8NGJ6 313 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 TMEM263Q8WUH6 116 aaKnown RBP-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 CNFNQ9BYD5 112 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 NPVFQ9HCQ7 196 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 RABAC1Q9UI14 185 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 ASB4Q9Y574 426 aa-0.98□□□□□ -2.57
SCARNA1-201ENST00000517138 TRAV12-2A0A075B6T6 113 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms