RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 SMIM24O75264 130 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 APOC3P02656 99 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 CDKN2CP42773 168 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 PTRHD1Q6GMV3 140 aaKnown RBP-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 HRCT1Q6UXD1 115 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 COX6B2Q6YFQ2 88 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 TMED4Q7Z7H5 227 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 CTAGE3PQ8IX95 158 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 PTPN23Q9H3S7 1636 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 SETBP1Q9Y6X0 1596 aa-1.82□□□□□ -2.7
RNU6-1258P-201ENST00000516911 MYH3P11055 1940 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 RPL7P18124 248 aaKnown RBP-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 LINC01545Q5VT33 79 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 DCUN1D2Q6PH85 259 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 PARVGQ9HBI0 331 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 TRAPPC2LQ9UL33 140 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 LINC00312Q9Y6C7 94 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 V9GYH0 126 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 ZNF236Q9UL36 1845 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 HMGXB3Q12766 1538 aa-1.83□□□□□ -2.7
RNU6-1258P-201ENST00000516911 M0QX08 132 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 NIPSNAP2O75323 286 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 GNG3P63215 75 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 DEFB110Q30KQ9 67 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 CLLU1Q5K131 121 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 Q8N8P6 123 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 PXDNQ92626 1479 aa-1.84□□□□□ -2.7
RNU6-1258P-201ENST00000516911 ADCY9O60503 1353 aa-1.85□□□□□ -2.7
RNU6-1258P-201ENST00000516911 NWD2Q9ULI1 1742 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 GOLGB1Q14789 3259 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 NKTRP30414 1462 aaKnown RBP-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 PLB1Q6P1J6 1458 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 SHANK2Q9UPX8 1470 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 A0A087WVE0 104 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 E7EQ34 232 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 UBE2D3P61077 147 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 UBE2D2P62837 147 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 DHRS4L2Q6PKH6 230 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 SPTSSBQ8NFR3 76 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 DNAJC15Q9Y5T4 150 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 DAPK1P53355 1430 aa-1.85□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CDC42BPAQ5VT25 1732 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 KIF21AQ7Z4S6 1674 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 HLA-DRB4P13762 266 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 TPPP2P59282 170 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 UBE2G1P62253 170 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 RGS21Q2M5E4 152 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 BAGE2Q86Y30 109 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 STX12Q86Y82 276 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 SMIM20Q8N5G0 67 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 AMELXQ99217 191 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 BANF2Q9H503 90 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 NDUFA4L2Q9NRX3 87 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 HLA-DRB4X5D2U9 266 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 TULP4Q9NRJ4 1543 aa-1.86□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CICQ96RK0 1608 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 LINC00959A0A1B0GUT2 108 aa-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 XIRP2A4UGR9 3374 aa-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 UQCR11O14957 56 aa-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 PAEPP09466 180 aa-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 MAGOHBQ96A72 148 aaKnown RBP-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CCDC115Q96NT0 180 aa-1.87□□□□□ -2.71
RNU6-1258P-201ENST00000516911 SERPINB1P30740 379 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 POLR2HP52434 150 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 B2MP61769 119 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 REEP5Q00765 189 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 Q6AWC8 147 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 PPP1R2P3Q6NXS1 205 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 WFDC9Q8NEX5 89 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 MRPL40Q9NQ50 206 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 ERCC6Q03468 1493 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CCDC141Q6ZP82 1450 aa-1.88□□□□□ -2.71
RNU6-1258P-201ENST00000516911 DPM2O94777 84 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CBLN1P23435 193 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 MRPS25P82663 173 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 AKAP14Q86UN6 197 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 DEFB104AQ8WTQ1 72 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 THEM6Q8WUY1 208 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CFAP53Q96M91 514 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 LINC01600Q96MT4 127 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 AQP10Q96PS8 301 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 LENEPQ9Y5L5 61 aa-1.89□□□□□ -2.71
RNU6-1258P-201ENST00000516911 CCL8P80075 99 aa-1.9□□□□□ -2.71
RNU6-1258P-201ENST00000516911 DEFB136Q30KP8 78 aa-1.9□□□□□ -2.71
RNU6-1258P-201ENST00000516911 FDCSPQ8NFU4 85 aa-1.9□□□□□ -2.71
RNU6-1258P-201ENST00000516911 MAGI1Q96QZ7 1491 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1258P-201ENST00000516911 LYNX1G3V0Z9 82 aa-1.91□□□□□ -2.72
RNU6-1258P-201ENST00000516911 LSM2Q9Y333 95 aaKnown RBP-1.91□□□□□ -2.72
RNU6-1258P-201ENST00000516911 ATP10BO94823 1461 aa-1.91□□□□□ -2.72
RNU6-1258P-201ENST00000516911 MARF1Q9Y4F3 1742 aaKnown RBP-1.91□□□□□ -2.72
RNU6-1258P-201ENST00000516911 RAPGEF6Q8TEU7 1601 aa-1.91□□□□□ -2.72
RNU6-1258P-201ENST00000516911 E2F6O75461 281 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 SNCGO76070 127 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 IL5P05113 134 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 S100A7L2Q5SY68 101 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 C10orf128Q5T292 105 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 TAC4Q86UU9 113 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 OR8I2Q8N0Y5 310 aa-1.92□□□□□ -2.72
RNU6-1258P-201ENST00000516911 SEC11CQ9BY50 192 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms