RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 APOMO95445 188 aa7.77□□□□□ -1.17
SNF8-215ENST00000515572 FUSP35637 526 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNF8-215ENST00000515572 PMVKQ15126 192 aa7.77□□□□□ -1.17
SNF8-215ENST00000515572 SERF1AO75920 110 aa7.76□□□□□ -1.17
SNF8-215ENST00000515572 CNBPP62633 177 aaKnown RBP7.76□□□□□ -1.17
SNF8-215ENST00000515572 HERVK_113P63121 156 aa7.76□□□□□ -1.17
SNF8-215ENST00000515572 ZC2HC1BQ5TFG8 222 aa7.76□□□□□ -1.17
SNF8-215ENST00000515572 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
SNF8-215ENST00000515572 CST9LQ9H4G1 147 aa7.76□□□□□ -1.17
SNF8-215ENST00000515572 A0A087WZ39 114 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIGD2BQ4VC39 106 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
SNF8-215ENST00000515572 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
SNF8-215ENST00000515572 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
SNF8-215ENST00000515572 DNAH11Q96DT5 4516 aa7.74□□□□□ -1.17
SNF8-215ENST00000515572 IGHV3-64A0A075B6Q5 118 aa7.74□□□□□ -1.17
SNF8-215ENST00000515572 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
SNF8-215ENST00000515572 LINC00310P59036 64 aa7.74□□□□□ -1.17
SNF8-215ENST00000515572 COX6A2Q02221 97 aa7.74□□□□□ -1.17
SNF8-215ENST00000515572 OR10D4PQ8NGN7 298 aa7.74□□□□□ -1.17
SNF8-215ENST00000515572 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 NDUFA6P56556 154 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 KRTAP10-1P60331 282 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 FAM19A2Q8N3H0 131 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
SNF8-215ENST00000515572 F8WDY8 70 aa7.72□□□□□ -1.17
SNF8-215ENST00000515572 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
SNF8-215ENST00000515572 IGLV4-69A0A075B6H9 119 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 IGLV5-45A0A087WSX0 123 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 NUPR1O60356 82 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 LEPROTL1O95214 131 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 SLPIP03973 132 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 SPAG11BQ08648 103 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 ORAOV1Q8WV07 137 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 C2orf48Q96LS8 159 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 PACRGQ96M98 296 aaPredicted RBP7.71□□□□□ -1.18
SNF8-215ENST00000515572 HSPB8Q9UJY1 196 aa7.71□□□□□ -1.18
SNF8-215ENST00000515572 TRAV12-1A0A0B4J245 112 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 IGLC3P0DOY3 106 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 LINC01620Q4KN68 170 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 CARD19Q96LW7 228 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 CAMK2N2Q96S95 79 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
SNF8-215ENST00000515572 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
SNF8-215ENST00000515572 Q6ZSA8 131 aa7.69□□□□□ -1.18
SNF8-215ENST00000515572 LINC00526Q96FQ7 95 aa7.69□□□□□ -1.18
SNF8-215ENST00000515572 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
SNF8-215ENST00000515572 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
SNF8-215ENST00000515572 H3BRM9 83 aa7.68□□□□□ -1.18
SNF8-215ENST00000515572 PRSS2P07478 247 aa7.68□□□□□ -1.18
SNF8-215ENST00000515572 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
SNF8-215ENST00000515572 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
SNF8-215ENST00000515572 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
SNF8-215ENST00000515572 SMIM1B2RUZ4 78 aa7.67□□□□□ -1.18
SNF8-215ENST00000515572 F8VRH5 84 aa7.67□□□□□ -1.18
SNF8-215ENST00000515572 NDUFA1O15239 70 aa7.67□□□□□ -1.18
SNF8-215ENST00000515572 FABP4P15090 132 aa7.67□□□□□ -1.18
SNF8-215ENST00000515572 KIAA0087Q14695 138 aa7.66□□□□□ -1.18
SNF8-215ENST00000515572 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
SNF8-215ENST00000515572 Q6ZRU5 148 aa7.66□□□□□ -1.18
SNF8-215ENST00000515572 Q8IZM0 81 aa7.66□□□□□ -1.18
SNF8-215ENST00000515572 MAP1LC3CQ9BXW4 147 aa7.66□□□□□ -1.18
SNF8-215ENST00000515572 MRPL35Q9NZE8 188 aaKnown RBP7.66□□□□□ -1.18
SNF8-215ENST00000515572 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
SNF8-215ENST00000515572 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
SNF8-215ENST00000515572 CKS1BP61024 79 aa7.65□□□□□ -1.18
SNF8-215ENST00000515572 C6orf226Q5I0X4 101 aa7.65□□□□□ -1.18
SNF8-215ENST00000515572 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
SNF8-215ENST00000515572 H0Y8G0 127 aa7.64□□□□□ -1.19
SNF8-215ENST00000515572 CXCL5P42830 114 aa7.64□□□□□ -1.19
SNF8-215ENST00000515572 XGP55808 180 aa7.64□□□□□ -1.19
SNF8-215ENST00000515572 ODF1Q14990 250 aa7.64□□□□□ -1.19
SNF8-215ENST00000515572 TMEM170BQ5T4T1 132 aa7.64□□□□□ -1.19
SNF8-215ENST00000515572 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
SNF8-215ENST00000515572 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 PLNP26678 52 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 CIRBPQ14011 172 aaKnown RBP7.63□□□□□ -1.19
SNF8-215ENST00000515572 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 COX7B2Q8TF08 81 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 LINC00474Q9P2X8 69 aa7.63□□□□□ -1.19
SNF8-215ENST00000515572 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms