RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
DDR1-278ENST00000515233 IGHV3OR16-9A0A0B4J2B5 98 aa9.11□□□□□ -0.95
DDR1-278ENST00000515233 TCAPO15273 167 aa9.11□□□□□ -0.95
DDR1-278ENST00000515233 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
DDR1-278ENST00000515233 RPL32P62910 135 aaKnown RBP9.11□□□□□ -0.95
DDR1-278ENST00000515233 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
DDR1-278ENST00000515233 FAM104BQ5XKR9 115 aa9.11□□□□□ -0.95
DDR1-278ENST00000515233 C20orf78Q9BR46 151 aa9.11□□□□□ -0.95
DDR1-278ENST00000515233 H0Y9J4 135 aa9.1□□□□□ -0.95
DDR1-278ENST00000515233 COMMD7Q86VX2 200 aa9.1□□□□□ -0.95
DDR1-278ENST00000515233 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
DDR1-278ENST00000515233 NAT8BQ9UHF3 227 aa9.1□□□□□ -0.95
DDR1-278ENST00000515233 A0A087WZ39 114 aa9.09□□□□□ -0.95
DDR1-278ENST00000515233 NDUFA1O15239 70 aa9.09□□□□□ -0.95
DDR1-278ENST00000515233 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
DDR1-278ENST00000515233 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
DDR1-278ENST00000515233 ORAOV1Q8WV07 137 aa9.09□□□□□ -0.95
DDR1-278ENST00000515233 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
DDR1-278ENST00000515233 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
DDR1-278ENST00000515233 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
DDR1-278ENST00000515233 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
DDR1-278ENST00000515233 FAM168BA1KXE4 195 aa9.07□□□□□ -0.96
DDR1-278ENST00000515233 FAM74A3Q4VXF1 159 aa9.07□□□□□ -0.96
DDR1-278ENST00000515233 C10orf25Q5T742 122 aa9.07□□□□□ -0.96
DDR1-278ENST00000515233 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
DDR1-278ENST00000515233 A0A1B0GW15 77 aa9.06□□□□□ -0.96
DDR1-278ENST00000515233 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
DDR1-278ENST00000515233 CKS2P33552 79 aa9.06□□□□□ -0.96
DDR1-278ENST00000515233 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
DDR1-278ENST00000515233 SMIM27A0A1W2PRY6 76 aa9.05□□□□□ -0.96
DDR1-278ENST00000515233 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
DDR1-278ENST00000515233 RPL23P62829 140 aaKnown RBP9.05□□□□□ -0.96
DDR1-278ENST00000515233 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
DDR1-278ENST00000515233 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
DDR1-278ENST00000515233 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
DDR1-278ENST00000515233 SMDT1Q9H4I9 107 aa9.05□□□□□ -0.96
DDR1-278ENST00000515233 HBBP68871 147 aa9.04□□□□□ -0.96
DDR1-278ENST00000515233 KIAA0087Q14695 138 aa9.04□□□□□ -0.96
DDR1-278ENST00000515233 FAM19A5Q7Z5A7 132 aaPredicted RBP9.04□□□□□ -0.96
DDR1-278ENST00000515233 IFITM10A6NMD0 228 aa9.03□□□□□ -0.96
DDR1-278ENST00000515233 GAGE2EQ4V326 116 aa9.03□□□□□ -0.96
DDR1-278ENST00000515233 GAGE2DQ9UEU5 116 aa9.03□□□□□ -0.96
DDR1-278ENST00000515233 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
DDR1-278ENST00000515233 MUC2Q02817 5179 aa9.02□□□□□ -0.97
DDR1-278ENST00000515233 TRBV30A0A0K0K1B3 111 aa9.01□□□□□ -0.97
DDR1-278ENST00000515233 D6R8Y8 96 aa9.01□□□□□ -0.97
DDR1-278ENST00000515233 M0QXV9 152 aa9.01□□□□□ -0.97
DDR1-278ENST00000515233 RPL13AP40429 203 aaKnown RBP9.01□□□□□ -0.97
DDR1-278ENST00000515233 NAT8Q9UHE5 227 aa9.01□□□□□ -0.97
DDR1-278ENST00000515233 PYGO1Q9Y3Y4 419 aa9.01□□□□□ -0.97
DDR1-278ENST00000515233 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
DDR1-278ENST00000515233 F8W036 122 aa9□□□□□ -0.97
DDR1-278ENST00000515233 NPYP01303 97 aa9□□□□□ -0.97
DDR1-278ENST00000515233 PPBPP02775 128 aa9□□□□□ -0.97
DDR1-278ENST00000515233 S100A8P05109 93 aa9□□□□□ -0.97
DDR1-278ENST00000515233 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
DDR1-278ENST00000515233 UBE2BP63146 152 aa9□□□□□ -0.97
DDR1-278ENST00000515233 ADIRFQ15847 76 aa9□□□□□ -0.97
DDR1-278ENST00000515233 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
DDR1-278ENST00000515233 UBE2D1P51668 147 aa8.99□□□□□ -0.97
DDR1-278ENST00000515233 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
DDR1-278ENST00000515233 CARHSP1Q9Y2V2 147 aaKnown RBP8.99□□□□□ -0.97
DDR1-278ENST00000515233 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
DDR1-278ENST00000515233 RAB5AP20339 215 aa8.98□□□□□ -0.97
DDR1-278ENST00000515233 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
DDR1-278ENST00000515233 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
DDR1-278ENST00000515233 C9JQL5 133 aa8.97□□□□□ -0.97
DDR1-278ENST00000515233 PRR4Q16378 134 aa8.97□□□□□ -0.97
DDR1-278ENST00000515233 MRPL54Q6P161 138 aaKnown RBP8.97□□□□□ -0.97
DDR1-278ENST00000515233 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
DDR1-278ENST00000515233 PACRGQ96M98 296 aaPredicted RBP8.97□□□□□ -0.97
DDR1-278ENST00000515233 PRSS47A8MTI9 375 aa8.96□□□□□ -0.98
DDR1-278ENST00000515233 ZNF861PO60384 105 aa8.96□□□□□ -0.98
DDR1-278ENST00000515233 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
DDR1-278ENST00000515233 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
DDR1-278ENST00000515233 TMEM136Q6ZRR5 245 aa8.95□□□□□ -0.98
DDR1-278ENST00000515233 TEX43Q6ZNM6 134 aa8.94□□□□□ -0.98
DDR1-278ENST00000515233 TMEM218A2RU14 115 aa8.93□□□□□ -0.98
DDR1-278ENST00000515233 NUPR1O60356 82 aa8.93□□□□□ -0.98
DDR1-278ENST00000515233 PEA15Q15121 130 aa8.93□□□□□ -0.98
DDR1-278ENST00000515233 PRELID3AQ96N28 172 aa8.93□□□□□ -0.98
DDR1-278ENST00000515233 SRSF3P84103 164 aaKnown RBP8.92□□□□□ -0.98
DDR1-278ENST00000515233 Q6ZN92 141 aa8.92□□□□□ -0.98
DDR1-278ENST00000515233 ATP5L2Q7Z4Y8 100 aa8.92□□□□□ -0.98
DDR1-278ENST00000515233 SVBPQ8N300 66 aa8.92□□□□□ -0.98
DDR1-278ENST00000515233 AMELXQ99217 191 aa8.92□□□□□ -0.98
DDR1-278ENST00000515233 C22orf24Q9Y442 160 aa8.92□□□□□ -0.98
DDR1-278ENST00000515233 APOC3P02656 99 aa8.91□□□□□ -0.98
DDR1-278ENST00000515233 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
DDR1-278ENST00000515233 Q8IZM0 81 aa8.91□□□□□ -0.98
DDR1-278ENST00000515233 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
DDR1-278ENST00000515233 SEC11CQ9BY50 192 aa8.91□□□□□ -0.98
DDR1-278ENST00000515233 LAMTOR2Q9Y2Q5 125 aa8.91□□□□□ -0.98
DDR1-278ENST00000515233 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
DDR1-278ENST00000515233 SNAPINO95295 136 aa8.9□□□□□ -0.98
DDR1-278ENST00000515233 PRSS2P07478 247 aa8.9□□□□□ -0.98
DDR1-278ENST00000515233 NPSP0C0P6 89 aa8.9□□□□□ -0.98
DDR1-278ENST00000515233 CKS1BP61024 79 aa8.9□□□□□ -0.98
DDR1-278ENST00000515233 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
DDR1-278ENST00000515233 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms