RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 TSPAN13O95857 204 aa15.95■□□□□ 0.14
PDE4D-223ENST00000515011 DAD1P61803 113 aa15.95■□□□□ 0.14
PDE4D-223ENST00000515011 TIMM17BO60830 172 aa15.94■□□□□ 0.14
PDE4D-223ENST00000515011 CELA1Q9UNI1 258 aa15.93■□□□□ 0.14
PDE4D-223ENST00000515011 ADAMTSL4-AS1Q5T5F5 129 aa15.93■□□□□ 0.14
PDE4D-223ENST00000515011 MIAQ16674 131 aa15.92■□□□□ 0.14
PDE4D-223ENST00000515011 OXLD1Q5BKU9 147 aa15.92■□□□□ 0.14
PDE4D-223ENST00000515011 TRRAPQ9Y4A5 3859 aa15.92■□□□□ 0.14
PDE4D-223ENST00000515011 PRO1854Q9UHT4 67 aa15.92■□□□□ 0.14
PDE4D-223ENST00000515011 A0A0B4J2C4 111 aa15.91■□□□□ 0.14
PDE4D-223ENST00000515011 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.9■□□□□ 0.14
PDE4D-223ENST00000515011 EIF4EBP3O60516 100 aaPredicted RBP15.9■□□□□ 0.14
PDE4D-223ENST00000515011 ATP5G1P05496 136 aa15.9■□□□□ 0.14
PDE4D-223ENST00000515011 SPART-AS1P0CW21 52 aa15.9■□□□□ 0.14
PDE4D-223ENST00000515011 KRTAP10-11P60412 298 aa15.9■□□□□ 0.14
PDE4D-223ENST00000515011 C3orf56Q8N813 242 aa15.9■□□□□ 0.14
PDE4D-223ENST00000515011 SHISA2Q6UWI4 295 aa15.89■□□□□ 0.13
PDE4D-223ENST00000515011 Q9H8V8 135 aa15.89■□□□□ 0.13
PDE4D-223ENST00000515011 A0A1B0GUV1 79 aa15.87■□□□□ 0.13
PDE4D-223ENST00000515011 EGFEM1PQ0D2K5 195 aa15.87■□□□□ 0.13
PDE4D-223ENST00000515011 PRSS2P07478 247 aa15.87■□□□□ 0.13
PDE4D-223ENST00000515011 NBEAL2Q6ZNJ1 2754 aa15.86■□□□□ 0.13
PDE4D-223ENST00000515011 A0A096LPF7 62 aa15.86■□□□□ 0.13
PDE4D-223ENST00000515011 ZNF625Q96I27 306 aaPredicted RBP15.86■□□□□ 0.13
PDE4D-223ENST00000515011 IGKV3OR2-268A0A0C4DH90 116 aa15.86■□□□□ 0.13
PDE4D-223ENST00000515011 IFITM1P13164 125 aa15.85■□□□□ 0.13
PDE4D-223ENST00000515011 FBN1P35555 2871 aaKnown RBP15.85■□□□□ 0.13
PDE4D-223ENST00000515011 TRAV26-1A0A087WT03 109 aa15.85■□□□□ 0.13
PDE4D-223ENST00000515011 IGHV3-33P01772 117 aa15.85■□□□□ 0.13
PDE4D-223ENST00000515011 RBX1P62877 108 aa15.85■□□□□ 0.13
PDE4D-223ENST00000515011 CIRBPQ14011 172 aaKnown RBP15.85■□□□□ 0.13
PDE4D-223ENST00000515011 OCIAD2Q56VL3 154 aa15.85■□□□□ 0.13
PDE4D-223ENST00000515011 LYRM7Q5U5X0 104 aa15.85■□□□□ 0.13
PDE4D-223ENST00000515011 IGHV3OR16-9A0A0B4J2B5 98 aa15.84■□□□□ 0.13
PDE4D-223ENST00000515011 H3BMG7 143 aa15.84■□□□□ 0.13
PDE4D-223ENST00000515011 TMEM262E9PQX1 116 aa15.83■□□□□ 0.13
PDE4D-223ENST00000515011 LOC107984156A0A0G2JMH3 177 aa15.83■□□□□ 0.12
PDE4D-223ENST00000515011 LINC00959A0A1B0GUT2 108 aa15.83■□□□□ 0.12
PDE4D-223ENST00000515011 HERV-K104P63124 156 aa15.83■□□□□ 0.12
PDE4D-223ENST00000515011 ARL17AQ8IVW1 177 aa15.83■□□□□ 0.12
PDE4D-223ENST00000515011 TEX48A0A1B0GUV7 120 aa15.82■□□□□ 0.12
PDE4D-223ENST00000515011 PRIMA1Q86XR5 153 aa15.82■□□□□ 0.12
PDE4D-223ENST00000515011 F8W1H4 67 aa15.81■□□□□ 0.12
PDE4D-223ENST00000515011 SFTA2Q6UW10 78 aa15.81■□□□□ 0.12
PDE4D-223ENST00000515011 ERG28Q9UKR5 140 aa15.8■□□□□ 0.12
PDE4D-223ENST00000515011 A0A087WZ39 114 aa15.8■□□□□ 0.12
PDE4D-223ENST00000515011 NPC2P61916 151 aa15.8■□□□□ 0.12
PDE4D-223ENST00000515011 COX7B2Q8TF08 81 aa15.8■□□□□ 0.12
PDE4D-223ENST00000515011 DAND5Q8N907 189 aa15.79■□□□□ 0.12
PDE4D-223ENST00000515011 MRPL23Q16540 153 aaKnown RBP15.78■□□□□ 0.12
PDE4D-223ENST00000515011 HTN3P15516 51 aa15.77■□□□□ 0.12
PDE4D-223ENST00000515011 PRO0461Q9UI25 63 aa15.77■□□□□ 0.12
PDE4D-223ENST00000515011 LINC00308Q8TCZ7 52 aa15.77■□□□□ 0.11
PDE4D-223ENST00000515011 SS18Q15532 418 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 MEIG1Q5JSS6 88 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 SH2D6Q7Z4S9 175 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 ICOSQ9Y6W8 199 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 TRBV20-1A0A075B6N2 111 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 PSMB2P49721 201 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 RETNQ9HD89 108 aa15.76■□□□□ 0.11
PDE4D-223ENST00000515011 K7ERU9 68 aa15.75■□□□□ 0.11
PDE4D-223ENST00000515011 H7C2G1 150 aa15.74■□□□□ 0.11
PDE4D-223ENST00000515011 TCL1BO95988 128 aa15.74■□□□□ 0.11
PDE4D-223ENST00000515011 WFDC2Q14508 124 aa15.74■□□□□ 0.11
PDE4D-223ENST00000515011 C5orf38Q86SI9 138 aa15.74■□□□□ 0.11
PDE4D-223ENST00000515011 COPS9Q8WXC6 57 aa15.74■□□□□ 0.11
PDE4D-223ENST00000515011 TOMM7Q9P0U1 55 aa15.73■□□□□ 0.11
PDE4D-223ENST00000515011 A0A0U1RRA0 63 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 Q1RN00 199 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 CLPSL2Q6UWE3 100 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 PPDPFQ9H3Y8 114 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 SCGB1C2P0DMR2 95 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 XCL1P47992 114 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 LELP1Q5T871 98 aa15.72■□□□□ 0.11
PDE4D-223ENST00000515011 SOSTDC1Q6X4U4 206 aa15.71■□□□□ 0.11
PDE4D-223ENST00000515011 LINC01561Q8N1V8 128 aa15.7■□□□□ 0.1
PDE4D-223ENST00000515011 MTURNQ8N3F0 131 aa15.7■□□□□ 0.1
PDE4D-223ENST00000515011 TRBV30A0A0K0K1B3 111 aa15.7■□□□□ 0.1
PDE4D-223ENST00000515011 LINC00269Q8N2A0 174 aa15.7■□□□□ 0.1
PDE4D-223ENST00000515011 C11orf68Q9H3H3 251 aaKnown RBP15.7■□□□□ 0.1
PDE4D-223ENST00000515011 COL6A5A8TX70 2615 aa15.7■□□□□ 0.1
PDE4D-223ENST00000515011 G3V4G9 280 aa15.69■□□□□ 0.1
PDE4D-223ENST00000515011 CMYA5Q8N3K9 4069 aa15.69■□□□□ 0.1
PDE4D-223ENST00000515011 Q8N3U1 123 aa15.69■□□□□ 0.1
PDE4D-223ENST00000515011 ANGP03950 147 aaKnown RBP15.68■□□□□ 0.1
PDE4D-223ENST00000515011 TRIAP1O43715 76 aa15.66■□□□□ 0.1
PDE4D-223ENST00000515011 REG3AQ06141 175 aa15.66■□□□□ 0.1
PDE4D-223ENST00000515011 RPL13AP40429 203 aaKnown RBP15.66■□□□□ 0.1
PDE4D-223ENST00000515011 RNF151Q2KHN1 245 aa15.66■□□□□ 0.1
PDE4D-223ENST00000515011 STAB1Q9NY15 2570 aa15.65■□□□□ 0.1
PDE4D-223ENST00000515011 SMCPP49901 116 aaPredicted RBP15.65■□□□□ 0.1
PDE4D-223ENST00000515011 CD164L2Q6UWJ8 174 aa15.65■□□□□ 0.1
PDE4D-223ENST00000515011 H3BNG1 76 aa15.65■□□□□ 0.1
PDE4D-223ENST00000515011 Q8IZM0 81 aa15.64■□□□□ 0.09
PDE4D-223ENST00000515011 IBA57-AS1B1ANH7 110 aa15.63■□□□□ 0.09
PDE4D-223ENST00000515011 ETDBQ3ZM63 59 aa15.63■□□□□ 0.09
PDE4D-223ENST00000515011 CHCHD10Q8WYQ3 142 aaPredicted RBP15.63■□□□□ 0.09
PDE4D-223ENST00000515011 MIR7-3HGQ8N6C7 128 aa15.62■□□□□ 0.09
PDE4D-223ENST00000515011 C6orf226Q5I0X4 101 aa15.62■□□□□ 0.09
PDE4D-223ENST00000515011 LYPD5Q6UWN5 251 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms