RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 C1orf196B1AJZ1 125 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 I3L3M4 83 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 PMCHP20382 165 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 COX6A2Q02221 97 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 Q8N8P6 123 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 PRR26Q8N8Z3 221 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 SMIM2Q9BVW6 85 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 MAP1LC3AQ9H492 121 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 PRR34Q9NV39 138 aa6.43□□□□□ -1.38
NEDD9-215ENST00000514660 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
NEDD9-215ENST00000514660 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
NEDD9-215ENST00000514660 TSHBP01222 138 aa6.42□□□□□ -1.38
NEDD9-215ENST00000514660 ANGP03950 147 aaKnown RBP6.42□□□□□ -1.38
NEDD9-215ENST00000514660 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
NEDD9-215ENST00000514660 IGKV2-24A0A0C4DH68 120 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 TCAPO15273 167 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 NUPR1O60356 82 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 CRPP02741 224 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 LINC00310P59036 64 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 PRR4Q16378 134 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 MIAQ16674 131 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 STPG4Q8N801 248 aa6.41□□□□□ -1.38
NEDD9-215ENST00000514660 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
NEDD9-215ENST00000514660 IGLV10-54A0A075B6I4 117 aa6.4□□□□□ -1.38
NEDD9-215ENST00000514660 LINC00614P0C842 121 aa6.4□□□□□ -1.38
NEDD9-215ENST00000514660 ESDP10768 282 aa6.4□□□□□ -1.38
NEDD9-215ENST00000514660 COTL1Q14019 142 aa6.4□□□□□ -1.38
NEDD9-215ENST00000514660 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
NEDD9-215ENST00000514660 A0A096LNI7 61 aa6.39□□□□□ -1.39
NEDD9-215ENST00000514660 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
NEDD9-215ENST00000514660 NDUFA6P56556 154 aa6.39□□□□□ -1.39
NEDD9-215ENST00000514660 LINC00269Q8N2A0 174 aa6.39□□□□□ -1.39
NEDD9-215ENST00000514660 KIR2DL4Q99706 377 aa6.39□□□□□ -1.39
NEDD9-215ENST00000514660 SERF1AO75920 110 aa6.38□□□□□ -1.39
NEDD9-215ENST00000514660 FCER1GP30273 86 aa6.38□□□□□ -1.39
NEDD9-215ENST00000514660 RAB5BP61020 215 aa6.38□□□□□ -1.39
NEDD9-215ENST00000514660 TMEM97Q5BJF2 176 aa6.38□□□□□ -1.39
NEDD9-215ENST00000514660 COA6Q5JTJ3 125 aaKnown RBP6.38□□□□□ -1.39
NEDD9-215ENST00000514660 FA2HQ7L5A8 372 aa6.38□□□□□ -1.39
NEDD9-215ENST00000514660 MUC17Q685J3 4493 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 A0A096LNJ9 63 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 IGHV1-24A0A0C4DH33 117 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 K7EMI3 77 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 AMTP48728 403 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 RBX1P62877 108 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 RNASEKQ6P5S7 137 aaKnown RBP6.37□□□□□ -1.39
NEDD9-215ENST00000514660 C15orf56Q8N910 161 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 C20orf203Q8NBC4 194 aa6.37□□□□□ -1.39
NEDD9-215ENST00000514660 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
NEDD9-215ENST00000514660 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-215ENST00000514660 IGKV2-29A2NJV5 120 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-215ENST00000514660 RPL39P62891 51 aaKnown RBP6.36□□□□□ -1.39
NEDD9-215ENST00000514660 PMCHL1Q16048 86 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 ORMDL2Q53FV1 153 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 Q6ZRP5 223 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 TMEM243Q9BU79 118 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
NEDD9-215ENST00000514660 GAGE6Q13070 117 aa6.35□□□□□ -1.39
NEDD9-215ENST00000514660 CHCHD5Q9BSY4 110 aa6.35□□□□□ -1.39
NEDD9-215ENST00000514660 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-215ENST00000514660 H7C423 109 aa6.34□□□□□ -1.39
NEDD9-215ENST00000514660 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.39
NEDD9-215ENST00000514660 C2orf66Q6UXQ4 117 aa6.34□□□□□ -1.39
NEDD9-215ENST00000514660 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
NEDD9-215ENST00000514660 TOMM6Q96B49 74 aa6.34□□□□□ -1.39
NEDD9-215ENST00000514660 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 HSBP1O75506 76 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 FGF6P10767 208 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 SNRPEP62304 92 aaKnown RBP6.33□□□□□ -1.4
NEDD9-215ENST00000514660 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
NEDD9-215ENST00000514660 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-215ENST00000514660 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 CYSLTR1Q9Y271 337 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
NEDD9-215ENST00000514660 IGLV4-60A0A075B6I1 120 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 HBDP02042 147 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 G0S2P27469 103 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 REG3AQ06141 175 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 HIGD2BQ4VC39 106 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 LINC00173Q6ZV60 143 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 TMEM18Q96B42 140 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
NEDD9-215ENST00000514660 IFITM10A6NMD0 228 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 UBE2L6O14933 153 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 S100A6P06703 90 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 ERASQ7Z444 233 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 SCGB3A1Q96QR1 104 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
NEDD9-215ENST00000514660 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
NEDD9-215ENST00000514660 MRPS36P82909 103 aaKnown RBP6.3□□□□□ -1.4
NEDD9-215ENST00000514660 ZC2HC1BQ5TFG8 222 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms