RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 MRPL52Q86TS9 123 aaKnown RBP3.83□□□□□ -1.8
CLDND1-229ENST00000513988 RGS5O15539 181 aa3.82□□□□□ -1.8
CLDND1-229ENST00000513988 FOXA3P55318 350 aaPredicted RBP3.82□□□□□ -1.8
CLDND1-229ENST00000513988 RPL32P62910 135 aaKnown RBP3.82□□□□□ -1.8
CLDND1-229ENST00000513988 RNASE13Q5GAN3 156 aaKnown RBP3.82□□□□□ -1.8
CLDND1-229ENST00000513988 C2orf82Q6UX34 121 aa3.82□□□□□ -1.8
CLDND1-229ENST00000513988 HIGD2AQ9BW72 106 aa3.82□□□□□ -1.8
CLDND1-229ENST00000513988 RBM38Q9H0Z9 239 aaKnown RBP3.82□□□□□ -1.8
CLDND1-229ENST00000513988 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
CLDND1-229ENST00000513988 IGKV2-28A0A075B6P5 120 aa3.81□□□□□ -1.8
CLDND1-229ENST00000513988 FAM25EA8MYX2 175 aa3.81□□□□□ -1.8
CLDND1-229ENST00000513988 PEX7O00628 323 aa3.81□□□□□ -1.8
CLDND1-229ENST00000513988 IGKV2D-28P01615 120 aa3.81□□□□□ -1.8
CLDND1-229ENST00000513988 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
CLDND1-229ENST00000513988 VBP1P61758 197 aa3.81□□□□□ -1.8
CLDND1-229ENST00000513988 GEMIN7Q9H840 131 aaKnown RBP3.81□□□□□ -1.8
CLDND1-229ENST00000513988 A6NN06 94 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 TRIAP1O43715 76 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 PMCHP20382 165 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 GCHFRP30047 84 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 UBE2G1P62253 170 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 MOBPQ13875 183 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 KIAA0087Q14695 138 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 C20orf166-AS1Q96NR2 134 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 TPPP3Q9BW30 176 aa3.8□□□□□ -1.8
CLDND1-229ENST00000513988 SDHAF1A6NFY7 115 aa3.79□□□□□ -1.8
CLDND1-229ENST00000513988 H0YIZ8 118 aa3.79□□□□□ -1.8
CLDND1-229ENST00000513988 TRGC1P0CF51 173 aa3.79□□□□□ -1.8
CLDND1-229ENST00000513988 LINC01551Q86U37 167 aa3.79□□□□□ -1.8
CLDND1-229ENST00000513988 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
CLDND1-229ENST00000513988 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 I3L3M4 83 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 AP3S2P59780 193 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 SSBP3-AS1Q7Z2R9 100 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 GATD1Q8NB37 220 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 HIST1H2BAQ96A08 127 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
CLDND1-229ENST00000513988 FMC1Q96HJ9 113 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 TMEM167BQ9NRX6 74 aa3.78□□□□□ -1.8
CLDND1-229ENST00000513988 IGLV9-49A0A0B4J1Y8 123 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 A0A1W2PRE2 83 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 C7orf77A4D0Y5 90 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 LTAP01374 205 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 STAG3L2P0CL84 134 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 STAG3L3P0CL85 134 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 CDC34P49427 236 aaPredicted RBP3.77□□□□□ -1.81
CLDND1-229ENST00000513988 RAB32Q13637 225 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 TOMM5Q8N4H5 51 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 SCGB1C1Q8TD33 95 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 TMEM242Q9NWH2 141 aa3.77□□□□□ -1.81
CLDND1-229ENST00000513988 TMEM238C9JI98 176 aa3.76□□□□□ -1.81
CLDND1-229ENST00000513988 DEFA1P59665 94 aa3.76□□□□□ -1.81
CLDND1-229ENST00000513988 SMAGPQ0VAQ4 97 aa3.76□□□□□ -1.81
CLDND1-229ENST00000513988 FAM231DQ6ZW35 169 aa3.76□□□□□ -1.81
CLDND1-229ENST00000513988 TRBV20-1A0A075B6N2 111 aa3.75□□□□□ -1.81
CLDND1-229ENST00000513988 RAB19A4D1S5 217 aa3.75□□□□□ -1.81
CLDND1-229ENST00000513988 NDUFB6O95139 128 aa3.75□□□□□ -1.81
CLDND1-229ENST00000513988 Q6ZUT4 128 aa3.75□□□□□ -1.81
CLDND1-229ENST00000513988 RAB26Q9ULW5 256 aa3.75□□□□□ -1.81
CLDND1-229ENST00000513988 CSDC2Q9Y534 153 aaKnown RBP3.75□□□□□ -1.81
CLDND1-229ENST00000513988 IGLV5-37A0A075B6J1 123 aa3.74□□□□□ -1.81
CLDND1-229ENST00000513988 TGIF2-C20orf24A0A0A6YYL0 155 aa3.74□□□□□ -1.81
CLDND1-229ENST00000513988 SCO1O75880 301 aa3.74□□□□□ -1.81
CLDND1-229ENST00000513988 CXorf1O96002 111 aa3.74□□□□□ -1.81
CLDND1-229ENST00000513988 NPSP0C0P6 89 aa3.74□□□□□ -1.81
CLDND1-229ENST00000513988 SPRR2DP22532 72 aa3.74□□□□□ -1.81
CLDND1-229ENST00000513988 M0R378 163 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 IGLC6P0CF74 106 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 CKS1BP61024 79 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 FAM210AQ96ND0 272 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
CLDND1-229ENST00000513988 RNASE7Q9H1E1 156 aaKnown RBP3.73□□□□□ -1.81
CLDND1-229ENST00000513988 FAM236DA0A1B0GTK5 79 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 IFNA1P01562 189 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 PRSS2P07478 247 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 FAM236CP0DP71 79 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 C6orf99Q4VX62 202 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 DEDD2Q8WXF8 326 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 FUNDC2Q9BWH2 189 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 NKX6-2Q9C056 277 aaPredicted RBP3.72□□□□□ -1.81
CLDND1-229ENST00000513988 VCX3BQ9H321 246 aa3.72□□□□□ -1.81
CLDND1-229ENST00000513988 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CLDND1-229ENST00000513988 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
CLDND1-229ENST00000513988 TEX261Q6UWH6 196 aa3.71□□□□□ -1.82
CLDND1-229ENST00000513988 ATP11AUNQ6ZP68 121 aa3.71□□□□□ -1.82
CLDND1-229ENST00000513988 VCX3AQ9NNX9 186 aa3.71□□□□□ -1.82
CLDND1-229ENST00000513988 CHTOPQ9Y3Y2 248 aaKnown RBP3.71□□□□□ -1.82
CLDND1-229ENST00000513988 F2Z2F3 143 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 AKR1C3P42330 323 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 FHITP49789 147 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 IL15RAQ13261 267 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 GAGE2AQ6NT46 116 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 FAM19A3Q7Z5A8 133 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 NRACQ8N912 160 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 SMIM3Q9BZL3 60 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 ST20Q9HBF5 79 aa3.7□□□□□ -1.82
CLDND1-229ENST00000513988 TOMM7Q9P0U1 55 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms