RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 C14orf132Q9NPU4 83 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 CDKN2A-AS1Q9UH64 79 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 EML6Q6ZMW3 1958 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 PTPRSQ13332 1948 aa2.28□□□□□ -2.04
PROM1-216ENST00000513946 TRAV23DV6A0A075B6W5 121 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 IGKV3D-7A0A0C4DH55 119 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 hDV103S1A0JD37 113 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 A8MTW9 85 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 H3BUX3 64 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 BPY2O14599 106 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 LECT2O14960 151 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 UBE2AP49459 152 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 MP68P56378 58 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 NREPQ16612 68 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 LINC00242Q5T6M2 205 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 CEMP1Q6PRD7 247 aaPredicted RBP2.27□□□□□ -2.05
PROM1-216ENST00000513946 ENHOQ6UWT2 76 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 LYPD2Q6UXB3 125 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 ATP11AUNQ6ZP68 121 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 LINC00336Q6ZUF6 198 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 C6orf223Q8N319 242 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 TYMSOSQ8TAI1 123 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 LINC01560Q8TB33 94 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 SMIM11BQ8TCY0 68 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 HEATR1Q9H583 2144 aaKnown RBP2.27□□□□□ -2.05
PROM1-216ENST00000513946 CEP192Q8TEP8 1941 aa2.27□□□□□ -2.05
PROM1-216ENST00000513946 UNC13CQ8NB66 2214 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 UTRNP46939 3433 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3-64A0A075B6Q5 118 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3-38A0A0C4DH36 116 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 E7EQL1 145 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 F8WEM9 126 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 K7EQG2 157 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 TFF1P04155 84 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 COX7BP24311 80 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 NBL1P41271 181 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 MIR7-3HGQ8N6C7 128 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 SPANXA2-OT1Q8N9U9 137 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 SMCR5Q8TEV8 140 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 C16orf74Q96GX8 76 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 UBE2E2Q96LR5 201 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 CHCHD7Q9BUK0 85 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 FAM215AQ9Y5M1 114 aa2.26□□□□□ -2.05
PROM1-216ENST00000513946 PCNX2A6NKB5 2137 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 RPL37AP8A6NKH3 93 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 HCG22E2RYF7 251 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 LY6HO94772 140 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3-11P01762 117 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 PI4KAP42356 2102 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 ESPL1Q14674 2120 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 DEFB109BQ30KR1 87 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 LINC00575Q6W349 94 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 Q6ZQT0 140 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 DIRC1Q969H9 104 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 ZNRD1Q9P1U0 126 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 PKIGQ9Y2B9 76 aa2.25□□□□□ -2.05
PROM1-216ENST00000513946 DYSFO75923 2080 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 KIAA1549Q9HCM3 1950 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3OR16-12A0A075B7B8 117 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 TRBV7-4A0A0J9YYF1 115 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3-23P01764 117 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 DHRS4-AS1Q9P1J3 65 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 CELA1Q9UNI1 258 aa2.24□□□□□ -2.05
PROM1-216ENST00000513946 INTS1Q8N201 2190 aaKnown RBP2.24□□□□□ -2.05
PROM1-216ENST00000513946 PCDH15Q96QU1 1955 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 GOLGB1Q14789 3259 aaKnown RBP2.23□□□□□ -2.05
PROM1-216ENST00000513946 TRGV2A0A075B6R0 118 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 GVQW2A0A096LPI5 108 aaPredicted RBP2.23□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3OR16-9A0A0B4J2B5 98 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 TRGV4A0A0C4DH28 118 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 IGHV3-66A0A0C4DH42 116 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 ETDCA0A1B0GVM5 59 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 B4DSR2 109 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 NCR3O14931 201 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 CCL18P55774 89 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 NDPQ00604 133 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 PRR9Q5T870 116 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
PROM1-216ENST00000513946 KTN1-AS1Q86SY8 53 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 CSNK1G2-AS1Q8NCQ2 148 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 TOMM7Q9P0U1 55 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 MYO9BQ13459 2157 aa2.23□□□□□ -2.05
PROM1-216ENST00000513946 RTTNQ86VV8 2226 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.22□□□□□ -2.05
PROM1-216ENST00000513946 IGKV2-29A2NJV5 120 aaPredicted RBP2.22□□□□□ -2.05
PROM1-216ENST00000513946 A6NDX4 124 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 C19orf84I3L1E1 186 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 SPINK13Q1W4C9 94 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 REG3GQ6UW15 175 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 Q8N2B8 174 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 LINC00337Q8N6G1 96 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 C3orf56Q8N813 242 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 HIGD2AQ9BW72 106 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 S4R3C0 116 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 CACNA1GO43497 2377 aa2.22□□□□□ -2.05
PROM1-216ENST00000513946 ASCC3Q8N3C0 2202 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms