RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 C2orf88Q9BSF0 95 aa7.44□□□□□ -1.22
HTT-213ENST00000513806 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
HTT-213ENST00000513806 EPPK1P58107 5090 aaKnown RBP7.44□□□□□ -1.22
HTT-213ENST00000513806 PRSS1P07477 247 aa7.43□□□□□ -1.22
HTT-213ENST00000513806 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
HTT-213ENST00000513806 Q8N814 137 aa7.43□□□□□ -1.22
HTT-213ENST00000513806 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
HTT-213ENST00000513806 CST9LQ9H4G1 147 aa7.43□□□□□ -1.22
HTT-213ENST00000513806 H0Y8G0 127 aa7.42□□□□□ -1.22
HTT-213ENST00000513806 PMVKQ15126 192 aa7.42□□□□□ -1.22
HTT-213ENST00000513806 LINC01620Q4KN68 170 aa7.42□□□□□ -1.22
HTT-213ENST00000513806 NTN5Q8WTR8 489 aaPredicted RBP7.42□□□□□ -1.22
HTT-213ENST00000513806 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
HTT-213ENST00000513806 ATP5LO75964 103 aa7.41□□□□□ -1.22
HTT-213ENST00000513806 NPSP0C0P6 89 aa7.41□□□□□ -1.22
HTT-213ENST00000513806 IGHV3OR16-9A0A0B4J2B5 98 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 hDV102S1A0JD36 115 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 COX7A2LO14548 114 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 EREGO14944 169 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 SLPIP03973 132 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 PAPPA-AS1Q5QFB9 102 aa7.4□□□□□ -1.22
HTT-213ENST00000513806 IGLV4-69A0A075B6H9 119 aa7.39□□□□□ -1.23
HTT-213ENST00000513806 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
HTT-213ENST00000513806 MALP21145 153 aa7.39□□□□□ -1.23
HTT-213ENST00000513806 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
HTT-213ENST00000513806 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
HTT-213ENST00000513806 IGLV5-52A0A0A0MRZ9 124 aa7.38□□□□□ -1.23
HTT-213ENST00000513806 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
HTT-213ENST00000513806 PMCHL2Q9BQD1 86 aa7.38□□□□□ -1.23
HTT-213ENST00000513806 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
HTT-213ENST00000513806 LRP1BQ9NZR2 4599 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 TINCRA0A1B0GVN0 87 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 IGLC3P0DOY3 106 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 LINC00469Q8N7U9 141 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 CHAC1Q9BUX1 264 aa7.37□□□□□ -1.23
HTT-213ENST00000513806 MRPL35Q9NZE8 188 aaKnown RBP7.37□□□□□ -1.23
HTT-213ENST00000513806 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
HTT-213ENST00000513806 IGHV3-64A0A075B6Q5 118 aa7.36□□□□□ -1.23
HTT-213ENST00000513806 A0A087WZ39 114 aa7.36□□□□□ -1.23
HTT-213ENST00000513806 GVQW2A0A096LPI5 108 aaPredicted RBP7.36□□□□□ -1.23
HTT-213ENST00000513806 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
HTT-213ENST00000513806 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
HTT-213ENST00000513806 HERVK_113P63121 156 aa7.36□□□□□ -1.23
HTT-213ENST00000513806 HSPB8Q9UJY1 196 aa7.36□□□□□ -1.23
HTT-213ENST00000513806 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 SNRPEP62304 92 aaKnown RBP7.35□□□□□ -1.23
HTT-213ENST00000513806 SPAG11BQ08648 103 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 ODF1Q14990 250 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 C14orf177Q52M58 125 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 CFAP161Q6P656 301 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 HIST3H2BBQ8N257 126 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
HTT-213ENST00000513806 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
HTT-213ENST00000513806 TRAV12-1A0A0B4J245 112 aa7.34□□□□□ -1.23
HTT-213ENST00000513806 IGLV5-45A0A087WSX0 123 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 F8VRH5 84 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 APOMO95445 188 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 S100A6P06703 90 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 C3orf79P0CE67 100 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 GCSHP23434 173 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 SEC11AP67812 179 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 HAMPP81172 84 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 KIAA0087Q14695 138 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 TMEM170BQ5T4T1 132 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 Q6ZRU5 148 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 PGPEP1Q9NXJ5 209 aa7.33□□□□□ -1.24
HTT-213ENST00000513806 SYS1-DBNDD2H3BUS1 97 aa7.32□□□□□ -1.24
HTT-213ENST00000513806 KRTDAPP60985 99 aa7.32□□□□□ -1.24
HTT-213ENST00000513806 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
HTT-213ENST00000513806 PACRGQ96M98 296 aaPredicted RBP7.32□□□□□ -1.24
HTT-213ENST00000513806 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
HTT-213ENST00000513806 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
HTT-213ENST00000513806 UNQ6190/PRO20217Q6UXQ8 127 aa7.31□□□□□ -1.24
HTT-213ENST00000513806 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
HTT-213ENST00000513806 CAMK2N2Q96S95 79 aa7.31□□□□□ -1.24
HTT-213ENST00000513806 HIST1H2BLQ99880 126 aa7.31□□□□□ -1.24
HTT-213ENST00000513806 FAM30AQ9NZY2 134 aa7.31□□□□□ -1.24
HTT-213ENST00000513806 C5orf52A6NGY3 159 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 S100A2P29034 98 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 CDPF1Q6NVV7 123 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 C9orf163Q8N9P6 203 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 CARD19Q96LW7 228 aa7.3□□□□□ -1.24
HTT-213ENST00000513806 TMEM223A0PJW6 202 aa7.29□□□□□ -1.24
HTT-213ENST00000513806 H3BRM9 83 aa7.29□□□□□ -1.24
HTT-213ENST00000513806 PANO1I0J062 215 aa7.29□□□□□ -1.24
HTT-213ENST00000513806 CHTF8P0CG12 524 aa7.29□□□□□ -1.24
HTT-213ENST00000513806 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
HTT-213ENST00000513806 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms