RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 IL7P13232 177 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 NTF3P20783 257 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 H2BFSP57053 126 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 COTL1Q14019 142 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 RNASE13Q5GAN3 156 aaKnown RBP2.68□□□□□ -1.98
HTT-211ENST00000513326 C9orf129Q5T035 196 aaKnown RBP2.68□□□□□ -1.98
HTT-211ENST00000513326 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 AMMECR1LQ6DCA0 310 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 RASL11AQ6T310 242 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 LINC00304Q8N9R0 145 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 RPL39LQ96EH5 51 aaKnown RBP2.68□□□□□ -1.98
HTT-211ENST00000513326 PKIGQ9Y2B9 76 aa2.68□□□□□ -1.98
HTT-211ENST00000513326 A0A1W2PRE2 83 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 LYRM1O43325 122 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 CXorf1O96002 111 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 SMIM17P0DL12 118 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 ATP6V0CP27449 155 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 UBE2BP63146 152 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 SS18Q15532 418 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 EIF5AL1Q6IS14 154 aaKnown RBP2.67□□□□□ -1.98
HTT-211ENST00000513326 C5orf38Q86SI9 138 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 PPP1R1CQ8WVI7 109 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 MED28Q9H204 178 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 NIT2Q9NQR4 276 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 TMEM167BQ9NRX6 74 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 C6orf48Q9UBA6 75 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 ZFP30Q9Y2G7 519 aa2.67□□□□□ -1.98
HTT-211ENST00000513326 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
HTT-211ENST00000513326 USH2AO75445 5202 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 INMT-MINDY4F8WBC2 141 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 MPC2O95563 127 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 CXCL1P09341 107 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 IGLC6P0CF74 106 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 UBE2G1P62253 170 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 SPAG11BQ08648 103 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 GATD1Q8NB37 220 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 ISOC2Q96AB3 205 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 FMC1Q96HJ9 113 aa2.66□□□□□ -1.98
HTT-211ENST00000513326 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
HTT-211ENST00000513326 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.98
HTT-211ENST00000513326 C19orf71A6NCJ1 209 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 CCDC160A6NGH7 325 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 CENPXA8MT69 81 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 COX7A2LO14548 114 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 APCSP02743 223 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 S100A5P33763 92 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 AKR1C3P42330 323 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 FOXA3P55318 350 aaPredicted RBP2.65□□□□□ -1.99
HTT-211ENST00000513326 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 UNQ6190/PRO20217Q6UXQ8 127 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 CEND1Q8N111 149 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 TSKUQ8WUA8 353 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 HIST1H2BAQ96A08 127 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 ACTR3CQ9C0K3 210 aaPredicted RBP2.65□□□□□ -1.99
HTT-211ENST00000513326 RNASE7Q9H1E1 156 aaKnown RBP2.65□□□□□ -1.99
HTT-211ENST00000513326 SMDT1Q9H4I9 107 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 CDC42SE2Q9NRR3 84 aa2.65□□□□□ -1.99
HTT-211ENST00000513326 PCP4L1A6NKN8 68 aa2.64□□□□□ -1.99
HTT-211ENST00000513326 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
HTT-211ENST00000513326 ESDP10768 282 aa2.64□□□□□ -1.99
HTT-211ENST00000513326 C3orf22Q8N5N4 141 aa2.64□□□□□ -1.99
HTT-211ENST00000513326 LINC00337Q8N6G1 96 aa2.64□□□□□ -1.99
HTT-211ENST00000513326 PSMG3Q9BT73 122 aaPredicted RBP2.64□□□□□ -1.99
HTT-211ENST00000513326 VCX2Q9H322 139 aa2.64□□□□□ -1.99
HTT-211ENST00000513326 TMEM242Q9NWH2 141 aa2.64□□□□□ -1.99
HTT-211ENST00000513326 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
HTT-211ENST00000513326 TRAV13-1A0A0B4J241 112 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 SDHAF1A6NFY7 115 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 A8MU10 97 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 G3V3Q6 166 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 TLX1NBP0CAT3 122 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 ZNF25P17030 456 aaPredicted RBP2.63□□□□□ -1.99
HTT-211ENST00000513326 LYZL1Q6UWQ5 148 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 Q6ZUT4 128 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 BAGE2Q86Y30 109 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 OR2D3Q8NGH3 330 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 ORAOV1Q8WV07 137 aa2.63□□□□□ -1.99
HTT-211ENST00000513326 CTXND1A0A1B0GTU2 59 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 A0A1B0GV50 99 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 SNAPINO95295 136 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 NCR2O95944 276 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 CTRLP40313 264 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 RPL7L1Q6DKI1 246 aaKnown RBP2.62□□□□□ -1.99
HTT-211ENST00000513326 C2orf82Q6UX34 121 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 MRPL52Q86TS9 123 aaKnown RBP2.62□□□□□ -1.99
HTT-211ENST00000513326 KRTAP13-1Q8IUC0 172 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 LINC00469Q8N7U9 141 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 STOML3Q8TAV4 291 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 FAM104AQ969W3 186 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 TMEM101Q96IK0 257 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 BTF3L4Q96K17 158 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 TNFSF18Q9UNG2 199 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 C22orf24Q9Y442 160 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 ALG5Q9Y673 324 aa2.62□□□□□ -1.99
HTT-211ENST00000513326 FAM240BA0A1B0GVZ2 78 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 MAP1LC3B2A6NCE7 125 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 M0R2T5 61 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 NDUFA1O15239 70 aa2.61□□□□□ -1.99
HTT-211ENST00000513326 BCE1O60756 84 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms